Malus domestica (apple): 103451423
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Entry
103451423 CDS
T03194
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103451423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103451423
Spliceosome [BR:
mdm03041
]
Common components
Common spliceosomal components
SR proteins
103451423
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103451423
NCBI-ProteinID:
XP_070665316
LinkDB
All DBs
Position
12:complement(join(31676189..31676243,31676341..31676458,31676867..31677233))
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AA seq
179 aa
AA seq
DB search
MSSRSSRTIYVGNLPGDIRMKEVEGLFLKYGPIVDIDLKIPPRPPGYAFVEYEDPRDAND
AIYGQDGYDFDGFRLRVELAHGGRHSSSHRSSSYNRSSSSRGASRRSDYHVLVTELPPAI
HQRAMPEARWNQVHNQKMDTTALSVARKRLEESNQLLSNDKGGPAQEQELESFPNTSGS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgatcgagtcgcactatctacgtcggcaatctacctggagatattcgtatg
aaagaagttgaaggtttattcctgaagtatgggcctattgttgacattgatctcaaaatc
cctccaagaccgccaggttatgcttttgttgagtatgaagatcctcgtgatgctaatgat
gcaatttatggccaggatgggtacgactttgatgggtttcgtttacgagttgaactagca
catggtggacggcactcctcgtcacatcgttccagcagttacaatcgtagtagcagcagc
cgtggtgcttctcgacgctctgactatcatgtgctagtcactgaattgcctcccgctatt
catcaacgtgccatgccagaagcaaggtggaatcaggttcacaatcagaaaatggataca
acagctctatctgttgctagaaagcggttggaggaatcaaatcagctactatccaatgac
aaggggggtcctgcacaagaacaggaacttgaatcatttcctaacactagtggatcatga
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integrated database retrieval system
