KEGG   Malus domestica (apple): 103451827
Entry
103451827         CDS       T03194                                 
Name
(RefSeq) cullin-3A
  KO
K03869  cullin 3
Organism
mdm  Malus domestica (apple)
Pathway
mdm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103451827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103451827
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103451827
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     103451827
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103451827
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B Glyco_hydro_68
Other DBs
NCBI-GeneID: 103451827
NCBI-ProteinID: XP_008389478
LinkDB
Position
13:complement(join(4836355..4838392,4839329..4839489))
AA seq 732 aa
MSNQKKRNFQIEAFKHRVVVDPKYADKTWNVLEHAIREIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTSHLKEISKSIESAQGGMFLEEMNKKWTEHNKALQMIRDILMYM
DRTYIPSTQKTPVHELGLNLWRDNIVRSSKIQTRLLNTLLELVLRERTGDVINRGLMRNI
IKMLMDLGPSVYQDDFENHFLEVSAEFYKGESQNFIECCDCGDYLQQAERRLNEELERVT
HYLDAKSEAKITNVVEKEMIANHMLRLVHMENSGLVNMLLDDKYEDLGRMYNLFRRVANG
LSTIREVMTSHIRETGKQLVSDPETLKDPVEFVQRLLDEKDKYDSIIRLSFNNDKTFLNA
LNSSFEYFINLNNRSPEFISLFVDDKLRKGLEGVSEEDVEIILDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDEAERSLIVKLKTECGYQFTSKLEGMFTDLKTAQDTMQGFYA
SHPELGDGPTLTVQVLTTGSWPTQPSVTCNLPLEMSELCEKFRSYYLGTHTGRRLSWQTN
MGTADIKATFGKGQRHELNVSTYQMCVLMLFNNADRLNYKEIEQATEIPALDLKRCLQSM
ACVKGKNVLRKEPMSKDIGEDDAFFVNDKFTSKLHKVKIGTVVAQKESEPEKQETRQRVE
EDRKPQIEAAIVRIMKSRRTLDHNNVISEVTKQLQSRFLANPTEVKKRIESLIEREFLER
DNVDRKLYRYLA
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagtaaccagaagaagcggaattttcagatagaggccttcaagcacagagtggtggtg
gatccgaaatacgctgacaagacgtggaatgttctggagcacgcaatccgcgagatttac
aatcacaatgccagtggcctcagcttcgaagagctttacagaaatgcctacaatatggtg
cttcacaaattcggcgagaagctttactcgggactggttacaaccatgacttcccatctc
aaagagatatctaaatcgattgaatctgctcagggtggaatgtttcttgaagaaatgaat
aagaaatggaccgaacacaacaaggcgttgcagatgattcgagacattctgatgtacatg
gacaggacttacattccgagcacccagaaaaccccagttcacgagcttgggctgaacctt
tggagagacaacattgtccgctctagcaagattcagacgaggcttctaaacacacttctt
gaactagtgctgagagaacgaacaggtgatgttatcaaccgcggtttgatgaggaatata
atcaagatgcttatggatttaggtccttcagtttaccaggacgactttgagaatcatttt
cttgaggtttcagctgaattttacaagggcgagtctcaaaattttatcgagtgctgcgat
tgtggagattatctgcagcaggctgagaggcgcctgaatgaggaactggagagggtgaca
cattacttggatgccaagagtgaagccaagataacgaatgtggtggagaaggagatgatt
gcaaaccacatgctgagattagtccacatggagaattcaggtttggtgaacatgcttctt
gatgacaagtacgaagaccttggaagaatgtacaacttgttccgtcgggttgccaacggt
ctctcaacaatacgagaagtgatgacttcccacatcagggaaaccggtaaacagctggtt
agtgatccggaaacgttgaaagatccggtggaatttgtccaaaggctcttggatgagaag
gataagtacgatagcatcattagattgtcttttaacaatgacaagacattcctaaatgcc
ttgaattcctctttcgagtacttcattaatctcaacaaccgctcgcctgagttcatctca
ctgttcgttgatgacaaactccgcaaaggtttggagggggtcagcgaggaggatgtagaa
attattctcgacaaggtgatgatgttgttccgttacctgcaggagaaagacgtattcgag
aagtactataaacagcatttggcaaagcggcttttgtccggtaaaactgtctccgacgag
gcagagagaagtttgatagttaagctcaagaccgaatgcggataccaatttacttcaaaa
ttagagggcatgtttacagacttgaaaactgcccaggatacaatgcaagggttttatgca
agtcatcccgagctaggggatggccctacattgactgtccaggttctgacgacagggtcc
tggccaactcaacctagtgtgacatgcaaccttccgttagagatgtcagaactctgtgag
aagttccgttcgtattacctcgggacgcatacaggtcggagattgtcctggcagactaac
atgggcacggcggatataaaggctaccttcgggaaaggccagaggcatgagttgaatgtc
tccacttaccaaatgtgtgtcctaatgctgttcaataatgccgatcggctgaactataag
gagattgagcaggcgacggagattcctgctttagatttgaagagatgtctgcaatccatg
gcttgtgtgaagggcaagaatgttcttcggaaagagcctatgagtaaagacattggtgag
gacgatgcttttttcgttaatgacaagttcacgagtaagttacataaggtgaagatagga
actgtggttgcacagaaggaatcagaacctgaaaagcaagagactcggcagagagtggag
gaggacaggaagccccagatcgaagctgcgattgtgaggatcatgaaatcaaggaggact
ctggatcataacaacgtaatatccgaggtcacaaagcagttgcaatctcgattcctggcc
aacccaacggaggttaagaagcggattgagtctcttatcgagcgggaatttttggaacgg
gacaatgtggacagaaaattgtatcggtatcttgcttaa

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