Malus domestica (apple): 103451846
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Entry
103451846 CDS
T03194
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103451846
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103451846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
TPR
FlxA
CENP-F_leu_zip
DUF3450
SYCE1
DUF948
LIN9_C
DUF2397
FAM120A
Ran-binding
TBCA_PH
CheZ
Importin_rep_6
bHLH_IRO3
NleF_casp_inhib
GIT1_C
PCRF
Takusan
TPR_TNPO3_IPO13_4th
DUF3810
Motif
Other DBs
NCBI-GeneID:
103451846
NCBI-ProteinID:
XP_008389506
LinkDB
All DBs
Position
13:join(4927299..4927436,4927795..4927947)
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AA seq
96 aa
AA seq
DB search
MSSRRSSRSRQSSSRNNNSISDEQITDLVTKLQQLLPEIRNRRSDKASASKVLEETCNYI
RNLHREVDDLSERLSELLATTDMDNDQAAIIRSLLM
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagaaggtcctcacggtcgaggcagtcgtcgagcaggaacaacaacagtatc
agtgatgaacagatcactgatctcgtaaccaagttacagcagcttcttcccgagattcgc
aataggcgttccgacaaggcgtcggcgtcgaaggttttggaagagacttgcaattatatt
agaaacttacacagagaggtggatgacctaagtgagcgcttatcagagcttttggccacg
acggacatggataacgaccaagcagccattattaggagtttacttatgtga
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