Malus domestica (apple): 103452126
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Entry
103452126 CDS
T03194
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00730
Thiamine metabolism
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
103452126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103452126
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
103452126
Ribosome biogenesis [BR:
mdm03009
]
Prokaryotic type
GTPases
103452126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_16
AAA_29
nSTAND1
AAA_21
AAA_22
AAA_23
Adeno_IVa2
IstB_IS21
IIGP
SMC_N
Guanylate_kin
AAA_28
AAA_30
TniB
Roc
Motif
Other DBs
NCBI-GeneID:
103452126
NCBI-ProteinID:
XP_070667062
LinkDB
All DBs
Position
13:join(8251746..8252405,8252877..8253098,8253202..8253396,8253515..8253708,8254250..8254436)
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AA seq
485 aa
AA seq
DB search
MPISSMSILRHRTIIPTTAAALPTVAKIIRQISTLRCVSVAAAKQHQNPNVSRKSQPPNK
KLLRAKHTFKDYSSLAPVLSPQDKPPLYESQTVGTVAAAQANFMRVIVEPPRSIEDSKVE
LLCVVKAVLKKIKRRVLVGDKVLVRSIDWVDRRGMIENVYQRSSEILDPPVANVDHLLVL
FSMEQPKLEPFALTRFLIEAESTGIPLTLALNKSELVDEEAKAAWKFRLRKWGYKPLFCS
VESKHGLDSLAFILRDQTSVIVGPSGVGKSSLINALRSNHHASDAAEGESLFDPISGSKW
YGDQLVGQVSTRSGRGKHTTRNVSLLPLSNGGYLADTPGFNQPSLTKVTKQSLAQTFPEI
RKMLSDSEPAKCSFNDCLHLGEPGCVVSADWERYPYYFQLLDEIRIREEFQLRTYGTKKE
GDVRYKAGDKGVQQAEPRLELKKHRRVSRKSMNQSLLDELDELDDDNLLDEENDAFLKAT
RDENQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttcctccatgtccatcctccgccaccgcaccatcatccccaccaccgccgcc
gccctcccaaccgtcgccaaaatcatccgccaaatctcaactctccggtgcgtctccgtc
gccgcagccaaacagcaccagaaccctaacgtctccaggaaatcccagcctccgaacaag
aagctcctcagagccaaacacaccttcaaggactactcctccctcgccccggtcctctct
ccccaggacaagcccccgctctacgagtcccagaccgtcggcacggtcgccgctgcccaa
gccaacttcatgcgcgtcatcgtggagcctcccagaagcatcgaagacagcaaagtggag
ctgctgtgcgtcgtgaaggcggtgctgaagaaaattaagaggagagtgctggttggggac
aaggtgctggtacggtcgattgattgggtggaccgccggggcatgatcgagaatgtgtac
cagcggagctccgagattcttgaccctccggttgcgaatgtggaccatctgctcgtgctc
ttctccatggagcagcccaagctcgagccgttcgcgctcaccaggttcttgatcgaggcc
gagtccaccggaattccgctcacactcgctctcaacaagtctgagcttgttgacgaagag
gcaaaggctgcgtggaagtttcggctgcgtaagtggggctacaagccccttttttgcagt
gttgaatcgaaacatggacttgattctcttgcatttatattgagagatcaaacgagtgtc
attgtcggtccaagtggagttggcaagtctagtctgattaatgctttgaggagcaaccac
catgcttctgatgctgcagaaggggaaagtttgtttgatccaatttcaggcagcaagtgg
tatggggaccagcttgttggacaggtttcaacaagaagtggcagagggaagcacactaca
cgcaatgtctcgttgcttccattgtctaacgggggttatcttgctgacactcctggcttc
aaccagcctagtttaacgaaagtcaccaagcaatctctagcacaaacattcccagagatc
aggaagatgctcagtgacagtgagcctgcaaaatgctcgttcaatgattgcctgcatctt
ggtgagccggggtgcgtggttagtgctgattgggaaagatatccatactatttccaactt
cttgatgagatcagaatcagagaggaatttcagttgaggacgtacggaaccaaaaaggag
ggtgatgtaaggtacaaggcgggagataagggcgttcaacaagctgaaccacggttggag
ctgaagaagcacaggagagtatctcgcaagagtatgaaccaatctttactcgatgaatta
gacgagctggatgatgacaacttactagatgaggaaaatgatgcgtttctcaaggcaacg
agggatgaaaaccagtag
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