KEGG   Malus domestica (apple): 103452135
Entry
103452135         CDS       T03194                                 
Name
(RefSeq) protein CIA1-like
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103452135
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103452135
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103452135
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103452135
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF12 B-prop_COPA_B_2nd DUF4082
Other DBs
NCBI-GeneID: 103452135
NCBI-ProteinID: XP_008389892
LinkDB
Position
12:complement(join(2595458..2595526,2596100..2596183,2596662..2596737,2597021..2597083,2597538..2597606,2597728..2597793,2598338..2598402,2598545..2598763,2598976..2599122,2599210..2599395))
AA seq 347 aa
MELAKELREIQKLEGHTDRVWSLAWNPATGVAGIPLSFASCSGDKTVRIWEQNLSTSSWD
CKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDYECVASLEGHENEVKSV
CWNPSGSMLTTCGRDKTVWVWEALPGNEFDCVSVLQGHTQDVKMVQWHPTRNLIFSCSYD
NTVKIWADDGDDDDWACVQTLGETNNGHSSTIWALSFNASGDKMVTCSDDLTLKIWGSDD
AKMSADGFAPWRHLCTLSGYHDRTIFSVHWSRDNIIASGAADDAIRFFVENDDQDGLVDG
PSYKLLLRKENAHDMDINSVQWSPGEDRVLASAADDGTIKIWELTSE
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggagttagcaaaagagctgcgagagattcagaagctagagggccacactgatagggtc
tggagcctcgcctggaatccggccaccggtgtcgccggaattcccctttccttcgcttcc
tgcagcggcgataagaccgttcgtatttgggaacaaaacctatccacttcttcttgggat
tgtaaggcagttctggatgaaacgcacaccagaaccgtccgatcgtgcgcttggtcccca
tctgggaagttattggccactgcaagcttcgatgccaccactgcaatttgggaaaatgtt
ggaggcgattacgaatgtgttgccagtctagagggtcatgaaaacgaagtgaaaagtgtg
tgttggaatccatctgggtctatgcttacgacttgcgggcgggataaaactgtatgggta
tgggaagcgctacccgggaatgagttcgactgtgtttcagtgttgcaaggccatacacag
gatgtgaagatggttcagtggcatcccactaggaatcttatattttcttgtagctatgat
aacactgtcaagatatgggcagatgatggtgatgatgatgattgggcgtgtgttcagaca
ttaggtgaaactaacaatggtcactcttctaccatctgggctctatcgtttaatgccagt
ggagacaaaatggtcacctgcagtgatgatcttactttaaagatatggggatcagacgat
gcaaagatgtctgctgatggctttgcaccttggcgacatctttgcactctttcaggttat
catgaccggacaatattttcagttcattggtcaagggacaatatcatagccagtggagct
gctgatgatgccataagattttttgtggagaacgatgatcaagatggtttggttgatgga
ccttcgtataaattgcttttgaggaaggagaatgcccatgacatggatatcaattctgtg
caatggagccctggggaggaccgggttcttgcttctgcagccgatgacgggacgattaaa
atatgggagctgacatctgaatag

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