KEGG   Malus domestica (apple): 103452280
Entry
103452280         CDS       T03194                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
mdm  Malus domestica (apple)
Pathway
mdm03420  Nucleotide excision repair
mdm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103452280
  09124 Replication and repair
   03420 Nucleotide excision repair
    103452280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:mdm03051]
    103452280
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103452280
Proteasome [BR:mdm03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    103452280
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103452280
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD Rad60-SLD_2 TECR_N UBA_RAD5A Crinkler Ubiquitin_4 Dsc3_N DUF2399
Other DBs
NCBI-GeneID: 103452280
NCBI-ProteinID: XP_028947183
LinkDB
Position
13:join(2751912..2751977,2752502..2752663,2753425..2753478,2753668..2753747,2753860..2753907,2754075..2754255,2754485..2754637,2754712..2754786,2754952..2754999,2755070..2755179,2755298..2755370,2755514..2755630)
AA seq 388 aa
MKIFVKTLKGSHFDVEVKPEDTVADVKKHIEACKGSDVYPAPQQMLIHQGKVLKDDTTLD
ENKVAENSFVVIMLTKSKSPPGEGSGASTAATTKAPQPSAHTGPPTVTFTASPAPAAAST
LPASVAMPAPVASATTDSSQADSYGQAASDLVAGTNLEGTIQQILDMGGGTWDRDTVVRA
LRAAFNNPARAIDYLYSGIPEQPEAPPAVRIPVGGQVTNPPPQPPQSAQPASAPPSRPNA
NPLNLFPQGLPNVGAGAGAGAAGNLDFLRDNQQFQALRSMVQANPQILQPMLQELGKQNP
NLVRLIGEHQADFLRLINEPAEGGEGNALGDAAVPQAIAITPEEREAIERLEAMGFARAI
VLQVFFACNKNEELTANYLLDHMHEFED
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaagatcttcgtcaagactctcaagggctcccacttcgacgtcgaagtgaagcctgag
gacacggttgctgatgtgaagaaacatatagaagcttgcaagggttcagatgtataccct
gctccacaacagatgctaattcatcaaggaaaagtgcttaaagatgacacaacattggac
gaaaataaagttgcggaaaatagctttgttgtgataatgttgactaagagtaagagccca
cccggtgaaggttcaggtgcatcaactgcagctacaactaaggcaccacagccaagtgca
catactggtcctccaactgtgacattcacagcaagtccagctccagcagcagcctcaaca
ctgcccgcatctgttgccatgcctgctcctgttgcttcggctaccacggacagttcacaa
gctgattcttacggccaagcagcatctgatctggtagctggaactaacttggagggaaca
attcagcaaattctagatatgggtggagggacatgggacagggatactgttgtacgtgct
cttcgtgctgcattcaacaacccagcaagagctattgactatctttattctggtatccct
gagcaacctgaagctccacctgcagtccgtattcctgtcggtgggcaagtcacaaaccct
ccaccacaacctccacagtcagcacaaccagcatctgctcctccaagcagacctaatgcc
aatcctttaaacctttttccacagggccttccgaatgtgggtgctggtgctggtgctggt
gctgcaggcaatcttgattttctacgcgacaaccaacagttccaagcattgcgatctatg
gtgcaggctaatccacaaatattgcagcctatgcttcaagagttggggaaacaaaaccct
aatctagtgaggctaattggtgagcatcaggctgacttccttcgcctgattaatgaacct
gctgaaggtggagaagggaacgcactgggggatgcagcagtgccacaggcaatagctatc
actcctgaggagcgtgaagctatagaacgtcttgaagcaatggggttcgctcgagcaatt
gtattgcaggtgttctttgcctgcaacaagaacgaagaattgaccgccaactacctctta
gaccacatgcatgaatttgaggactaa

DBGET integrated database retrieval system