Malus domestica (apple): 103452449
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Entry
103452449 CDS
T03194
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13095
splicing factor 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103452449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103452449
Spliceosome [BR:
mdm03041
]
Complex A
Other components
Complex A specific factors
103452449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Ras
Motif
Other DBs
NCBI-GeneID:
103452449
NCBI-ProteinID:
XP_008390162
LinkDB
All DBs
Position
03:join(745295..745552,745944..746075,746192..746231,746317..746399,747286..747363,747490..747543,747768..747902,748034..749368)
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AA seq
704 aa
AA seq
DB search
MSGTTMTPASSAGTQKVSMFAAKAGFVIPKNKLSGSLVPVFRGSKNLGAGDAGSGESKKQ
IQRKTKWGPDLTQDASVKKGRSLAYQTRVDQITQQLKSGMLEDENDEIEDLLSAPQDLHH
KSSKHQIDTKDVDQLELEKREAIGEILKLNPSYKAPPDYIPLLKEATVPIPVKEYPKYNF
VGLIYGPGSDNQKQLEKETGAKIQVYGTKAGTGQKAEIKPSDGSEIHGEYENLYVHISAD
TFEKVDAAVAVIELLVTSVSGNLAAVSSTGASVSADNAHVPNQVQDTTTSNMVPTTVVNQ
GMVQPLPGLAQTPLDGQFQYRGPFLSRGPSSTPMYMPGFTPLNSSRPNLNNPSHLSTSPF
NPAYLPSSFGLPPSLVSPRQNPPTTQFLPHTYMAPQPASVQTNVSAPLTFMGNRPLPAGS
STGWSSGPPAPQPGVASMPPPSNIPTGNMVSSVNHPIAAPSSIFIPLPQAGLPSTSLQAR
VPSSVSGSVPNIAPLKPPMMTAQSPGDFTFQPHRPQNPSFQTVPQPSSHFSAHNASLARP
MLPSPAPQAPSFQFPQPGSQVLSRPQLGDHMGQHPSAHMSAAPYARNSTATSVPPRLATF
LESSTVLPQTPHPPMRPSNFNPPHRMPNLPGPLPPRPGNYIQIQQSYPAHATRPEIPRAP
NQQFNNLAFSSGKSASGPGGGQQLYDPFSPTSANQQQGGNPVKM
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtacaacgatgacacctgcatcatcagctggtacacaaaaggtctccatgttt
gctgccaaggctgggtttgttataccgaaaaacaagctgtcgggttcacttgtgcctgtc
tttcgcggaagtaaaaacctaggagccggtgatgcaggtagtggagaaagtaagaaacag
attcagaggaaaacaaaatggggtcctgatctcacccaagatgcttctgtcaaaaaggga
agatctttagcttatcagactcgggtggatcaaattacacaacagctgaaatctggaatg
ttagaggatgagaatgatgagattgaggacttactatcagcacctcaagatctgcaccac
aaatcctctaagcatcaaattgatacaaaggatgtcgaccagttggaacttgaaaagcgg
gaagccataggtgagatattaaagttaaatccaagctacaaggccccacctgattatata
cctttgttgaaagaggctacagtccctattcctgtgaaagaatatcctaaatacaatttt
gttggcctgatatatggtcctggaagtgataaccagaaacaattagaaaaggaaaccgga
gccaagattcaagtctatggtaccaaagcagggacaggacagaaggctgaaataaaacca
tctgatgggagtgaaatccatggtgaatatgaaaacttatatgttcatatatcagctgac
acatttgagaaagtagatgcagcggttgctgtgattgagctcttagtcacctctgtatca
ggcaatctggcagcggttagcagtacaggtgcttcagtttctgctgataatgctcatgtt
cctaatcaagtccaggacactaccacctctaatatggttccaactactgtggtaaatcag
ggaatggtacaaccactgccaggactggcacaaactccactggatgggcagtttcagtac
cgtggtccatttctctcgaggggcccatcttccactcccatgtatatgcctggcttcact
cctctgaattcttcgagaccaaacctcaacaatccttcccatctttcaacatcacctttc
aaccctgcgtacctgccttcatcatttgggcttccgccatctcttgtttcccctagacaa
aatccaccaacaacacaatttttgccgcatacatatatggctccccagcctgcatcagtg
caaactaatgtttcagctcctctcacattcatgggaaaccgaccactgcctgctgggagc
tctactggatggtcaagcggtccaccagctccacaaccaggtgttgcgtccatgccacca
ccttcaaatataccaacggggaatatggtatcttctgtaaaccatcctattgcagcacca
agttctatttttattccactgcctcaagcaggacttccttctacatctctgcaagcaaga
gttccaagttctgtttctggaagtgttccaaatattgctcccctaaaaccaccaatgatg
acggctcaaagccctggcgatttcacttttcagccgcatcgaccacagaatccatccttc
caaacagttccccaaccaagcagtcacttttcagcccataacgcttctcttgccagacca
atgttgccgtctccagcacctcaagcaccgtctttccagtttcctcagccaggcagtcag
gtgttatcgagaccacaactcggtgaccacatgggtcagcatccatcagctcatatgtct
gctgctccctatgccagaaattcaactgccacctcagttcctcccagacttgcaacattt
ctagaatccagtaccgttctacctcagacgccacacccaccaatgagaccgagtaacttc
aatccacctcaccggatgcccaatttgccaggtcctctgcctccaaggccaggaaattac
attcaaattcagcaaagctatcctgctcacgcaactagacctgagatcccacgtgctcca
aatcaacagttcaacaaccttgcattttcctctggcaagtcggcatctggtcctggagga
ggacagcaactttatgatccattctcacccacttccgcgaatcaacagcagggaggtaat
ccagtaaagatgtga
DBGET
integrated database retrieval system
