Malus domestica (apple): 103452618
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Entry
103452618 CDS
T03194
Name
(RefSeq) uncharacterized protein isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103452618
Enzymes [BR:
mdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103452618
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103452618
Prokaryotic type
103452618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
103452618
NCBI-ProteinID:
XP_017192169
LinkDB
All DBs
Position
13:join(10432598..10432693,10432775..10432877,10433594..10433733,10433808..10434170,10434344..10434406,10434503..10434719,10435186..10435187)
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AA seq
327 aa
AA seq
DB search
MGSHAVVVGLPSPPNRNGSLSPPIPTTSISSSKKKDGIGEQMARKQTGDGGYKWRLVIAY
DGTRYAGWQYQSSPPTIQCFVENALMGATKLERKDLHFVGASRTDKGVHAWGQVAHFVTP
FNYDSIESIHAALNGLLPDDIRVREISPAVPEFHARFSARSKIYHYKIYNDTFMDPFQRH
YAYHSAHKLNAAVMREASKYFIGKHDFSAFVNASQKERVRDPVKDIFRFEVIEMGALLQL
EVEGSGFLYRQVRNMVALLIQIGREALPPDIVPKLLATRDRRALAKYTMFTPPHGLCLVT
VKYNEEHLRLPSSCSTTSFGRHYTIGS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtcatgcagttgtagtaggccttccttctcctccaaatcgtaacggctctctc
tctcctccaattcccacaacttctataagcagctcgaagaaaaaggatggaattggagag
caaatggcaaggaagcagacaggggatggtgggtacaagtggcgtttggtgattgcttat
gacggcacccgttatgcaggatggcaataccagagttcaccgcctacaatacagtgcttt
gtggagaatgctctaatgggcgcaacaaagctggaaaggaaggatcttcatttcgttggt
gcaagtaggacagataaaggagtacatgcctggggtcaggttgcacactttgtcacacct
ttcaactatgacagcattgaaagcattcatgctgctcttaacggtcttcttcctgatgat
atccgagttagggagatcagccctgcagtgcctgaattccatgctcgtttttcagcgaga
agcaagatttatcattacaaaatatataacgacacattcatggatccatttcagcgtcac
tatgcttaccatagtgctcataagctaaacgccgctgttatgcgagaagcttcaaagtat
tttattggaaagcatgatttctctgcttttgtcaatgcctcccagaaggaacgagtgcgt
gatccagtgaaggatatattccgttttgaggtcattgaaatgggagctcttttacagcta
gaagttgaaggctccggcttcttatacagacaagtccggaacatggttgctctgctgatt
caaattggaagggaagcgcttcctcctgatattgttcccaagctattggcaacacgagat
cgtagggcgcttgccaaatataccatgtttactccacctcatgggctttgtctcgtgacg
gtcaagtataacgaggagcatctacggcttccatccagttgctccacaaccagttttggt
aggcattatactatcggctcatag
DBGET
integrated database retrieval system
