Malus domestica (apple): 103452652
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Entry
103452652 CDS
T03194
Name
(RefSeq) polygalacturonase At1g48100
Organism
mdm
Malus domestica (apple)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
103452652
NCBI-ProteinID:
XP_008390405
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All DBs
Position
13:complement(join(11020686..11021187,11021948..11022029,11022209..11022416,11022515..11022559,11022663..11022830,11023247..11024167))
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AA seq
641 aa
AA seq
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MELVHWFRVLWITMTLLTFQYASNVEGRYHYHKRNKSASPPPTPAEDRGSPSPPSIAPPT
LVEKPVAPTPAEDRGSPSPPSIAPPTPAEEPFAPPIPAEEPVAPSTPSIAPPTPVEEPVA
PPTPAEEPVAPSTPSIAPPTPVEEPVAPPTPAEKPAAPSTPSIAPPTPVEEPVAPPTPAE
KPAAPSTPSIAPATPVEEPVAPPTPAEKPVAPSTPSITPPTPPPHVPSDPYPNDPGNNSS
NSSDCVFNVMDYGAVGDGSADDTAAFRQAWKEACAVESGVVLAPSDYCFKITSTIFSGPC
QPGLVFQVDGVLMPPDGPETWPTTDSLNQWLVFYRLDQMTFTGTGTIEGNGQKWWELPCK
PHRGPKGSTLPGPCDSPAMIRFFMSSNLVVRGLRIQNSPKFHMKFDGCEGVLIEKISISS
PKLSPNTDGIHIENTKSVAIYDSMISNGDDCISIGTGCANVDIMGVTCGPSHGISIGSLG
VHNSRACVSNITVRNAVIRESDNGARIKTWQGGTGCVSGILFENIQMENVLNCLLVDQYY
CLSKGCLNQTSAVLVTDLTYRNIKGTYDVRTPPIHFACSDTVACRNITLSEVELYPHEGE
LMDDPFCWNAYGIQETATIPPIDCLQEGEPQVAAEVSEYTC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgttcactggtttagagtcttatggatcacaatgactctattaaccttccag
tatgcaagcaatgtggaaggaagatatcattaccacaagagaaacaaaagcgcatcccct
cctcctacccctgcagaagatcggggttctccatcacccccaagcattgctcctcctacc
cttgtagaaaaaccagttgctcctacccctgcagaagatcggggttctccatcaccccca
agcattgctcctcctacccctgcagaagaaccatttgctcctcctatccctgcagaagag
ccagttgctccttcaaccccgagcattgctcctcctacccctgtagaagaaccagttgct
cctcctacccctgcagaagagccagttgctccttcaaccccgagcattgctcctcctact
ccggtagaagaaccagttgctcctcctacccctgcagaaaagccagctgctccttcaacc
ccgagcattgctcctcctacccctgtagaagaaccagttgctcctcctacccctgcagaa
aagccagctgctccttcaaccccgagcattgctcctgctacccctgtagaagaaccagtt
gctcctcctacccctgcagaaaagccagttgctccttcaaccccgagcattactcctcct
acccctcctccacatgttccctcagacccttacccaaatgaccctggaaacaactctagt
aattcttcagattgtgtgtttaatgtcatggattatggggcagttggagatggctctgct
gatgacactgctgcctttagacaggcttggaaggaagcctgtgctgttgaatcaggtgtt
gttttggctccttctgattactgcttcaaaatcacctcaacaattttttcaggtccatgc
cagccaggactagtattccaagtagatggggttttgatgccgccggacgggccagagacg
tggcctacaacagacagcctaaaccagtggcttgtgttttacagactcgaccaaatgact
ttcactggtactggaaccatcgaaggcaacggccaaaagtggtgggagctcccttgcaaa
cctcacaggggtcccaaaggatcaacactgccaggaccatgtgacagtcctgcgatgatc
agatttttcatgagctctaatttggtggtgagaggcttaagaatccaaaacagtccaaag
ttccacatgaaattcgatggctgtgaaggagtactgattgagaaaatatccatttcttca
ccaaagcttagccccaacacagatgggatccacatagagaacacaaaatctgttgcaata
tacgactcaatgattagcaacggtgatgactgcatttcaataggaactgggtgtgcaaat
gttgatataatgggggtcacttgcgggccaagtcacgggattagcattgggagccttggc
gtgcacaactctcgggcatgcgtctccaacatcacagtccgcaacgcagtcatacgtgaa
tcagacaatggcgcccgaatcaagacatggcaaggcgggacgggctgcgtatctggcatc
ctcttcgagaacatccagatggagaatgtgctcaactgcctgctagtagaccagtactac
tgcctatcaaagggatgcctaaaccaaacctcagcagtactagtcacagatttaacatac
agaaacataaaggggacgtacgatgtgaggacgcctcccattcactttgcatgcagtgac
accgtagcatgcagaaatattaccctctcagaagttgagctttacccacacgaaggagaa
ctcatggatgatcccttttgttggaatgcttatggaatccaagagactgctactattccc
cctattgattgcttgcaagagggggaacctcaggttgcggctgaggtgtctgagtatact
tgctag
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