KEGG   Malus domestica (apple): 103452822
Entry
103452822         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K11797  PH-interacting protein
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103452822
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103452822
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd WDR55 Bromodomain Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_HPS5 WD_LRWD1 Auxin_resp VPS8_N
Other DBs
NCBI-GeneID: 103452822
NCBI-ProteinID: XP_017192499
LinkDB
Position
13:join(11752109..11752464,11753245..11753399,11753795..11754034,11754392..11754501,11754596..11754673,11754792..11754898,11755429..11755523,11755614..11755729,11761607..11761710,11761790..11761867,11762001..11762079,11762232..11762400,11762589..11762659,11763250..11763330,11763413..11763483,11763840..11763936,11764053..11764112,11764260..11764314,11764400..11764797,11764886..11766697,11766991..11767563,11767688..11767746,11767862..11768078)
AA seq 1726 aa
MALQKFPSRDAPSVSMKPLSFLSKVHDKNQPEDLETTYITHAKEPDADIDIREVYFLIMH
FLSAGPCHRTCGQLWNELLEHQLLPRRYHAWYSRKGMHSEDENDDGKSFPLNYNMLVHRY
PHIENDHLVKLLKQLISSAAPPSRGTSGGNAPNAADVPTLLGRGSFSLLTYERDQIHNEM
KPPPAHMRWPHMKAHQVQGLRLREIGGGFTRHHRAPSIRAASYAIAKPSTMFEKMQFTKR
IRGHRNSVYCATFDCSGRYVITGSDDRLVKIWLMETAFCLASCRGHEGDITDLAVSSNNA
LVASSSNDHMIRVWRLPDGLPISVLRGHTAAVTAITFNPRPGSMYHLLSSSDDGTCRIWD
ARSSQVSPRIYIPRPSDAVVGRNSGPSSSTVTQDHHIFCCAFNANGTVFVTGSSDTLARV
WTASKPGSDESDQPNHEIDVLSGHENDVNYVQFSGCAGVSRFMVADTSKEENTPKFKNSW
FNHDNIVTCSRDGSAIIWIPRSRRSHGKAGRWTRAYHLKVPPPPMPPQPSRGGPRQRILP
TPRGVNMITWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIA
MSAGYDGKTIVWDIWEGIPIRTFETSHYKLVDGKFSPDGTSIILSDDVGQLYILDSGQGE
SQDDAQYDQFFLGDYRPLIHDSFGNVLDQETQLPAYRRNMQDLLCDSGMIPYEEPYQTAY
QKRRLGALGAEWRPSSLRLAVGPDFSLDPDYQMLPLADLDILTEPLPEFLDAMDWEPENG
IRSDDTDSEYHITEDYSTGGEQGSLSSNPSIDPECSEESEDEDAEMDGLRRSKRKKQKAD
NEVVTSSGRCVKRRNLDECAANSSRSNRARKSRHGRKASRKKCSSSLRPQRAAARNALSL
FSKITGRSADGEDEDGSEDDMSGSESPLQDSNIESDESDKQYQQGKHSKGKEVLLDESED
MVKPIEEFPVNTGSRRRLVLKLPRQESNKLVSRESTVNNRSNEDDLVDQSYRVPQEANEN
NTSPQDPMSSPGDEKCSKFETAVSGQSQRVENHLNFKGRISWGGSRARTAKRQRSGEFMS
LDALARASAVVGHNEKDYTKPENDSPYSESQRFRDKMDTVAIGNEKTTRASTSDGLNCEV
NVKEHSDFSECKDHDQLPKSVHMAPWDASTSSCLDKDGTGFSFKQNEKFIPVSTKLRSRR
ISRDPSPCKHEINSVVENMENDRTMEQGPVVPEDDGTHKFIPDHRYDGSRESDNQSDKNV
IASTHESVESSLQKNKMFSAVYRRVKPHRGRSNLEGDSGVNGEGCSYTSNTSNHNIIAGD
IQDDTTDGGCKTRSMGFKASACDPSSPDHDPKLAEGHEPGYTLNRKSSMDKFQLGNEERG
SSSRTKVGLRSTRNRRSSYLDMSPMDKRKPHQSGKKVSWLMLSAHEESSRYIPQLGDKVV
YLRQGHQEYFDLGGLRENPPWRFIKGRIRAVEFCNVQELEYSSRAGSGDSCCKLTIQFVD
PSSDVYGKSFKMTLPEVTGFPDFIVERTRFDSSMERNWSCRDHCKVWWKNEGEDDGKWWH
GRVKSKQFKSLEFPDSPWEMYTVQYKSDPSDVQLHSPWELFDEITQWEPPHIDDKSKKKL
HSAFAKLERSAGSRQDPFGVDKLMQLQQKPKFTNWCVVPISLDVIQSRLENDYYRSLEAL
KHDFKVMLANAETYLESNAVKRASDKELLGKLKCLSDWFTQTISSL
NT seq 5181 nt   +upstreamnt  +downstreamnt
atggctcttcaaaaatttccttctcgtgatgcaccttctgttagtatgaaacctttgagc
tttctcagtaaggtgcatgacaagaatcaacctgaggatctagagacaacttatataact
catgctaaggagcctgatgcggatattgacatcagagaagtgtattttcttatcatgcat
tttctgtcagctggcccatgccatagaacttgtggacagttgtggaacgaacttcttgaa
catcaacttttacctagaagatatcatgcttggtattcaaggaagggtatgcacagcgag
gatgaaaatgatgatgggaagtcatttcctttaaattacaatatgctggtgcacaggtat
cctcacattgaaaatgaccatttggtaaagcttttgaagcaattgatttcaagtgcagcc
ccaccatcaagaggtacgagtggtggaaatgctccaaatgcagctgatgtacctactctc
ttgggacgtggttcattttcgcttctgacctatgaaagggatcaaatacacaatgaaatg
aaaccccctcctgctcacatgcgttggcctcacatgaaagctcatcaggttcaagggcta
aggttgagagaaattgggggaggtttcacccgacatcaccgtgcaccgtctattcgtgct
gcatcttatgccattgcaaagccctcaaccatgtttgagaagatgcaatttaccaagagg
ataaggggccatcgaaactctgtctactgtgcaacatttgattgctcaggcaggtatgtt
attaccggttcagacgatcgcctagtgaagatctggttaatggaaactgcattttgctta
gccagctgccgtggacatgaaggagatatcacggatctggctgtgagttccaataatgct
ttggtggcatcctcctcaaatgaccatatgattcgagtatggcgcttgccagacggactg
ccaatttcagtattgcgaggacatactgcagctgttactgccattacatttaatcccagg
ccaggctctatgtaccaccttctatcttcatctgatgatggaacatgtaggatatgggat
gccaggagttctcaagtgagtccaaggatatacattccaagaccttcagatgctgtagtt
gggagaaacagtggtccatcttcaagcactgtcacacaggaccatcatatcttctgttgt
gcattcaatgctaatggaacagtctttgtcaccggtagctcggacactcttgcaagggtg
tggactgcttctaagccaggctcggatgagtcggaccaaccaaatcatgagattgatgtt
ttatctggccatgagaatgatgtcaattatgtacaatttagtggttgtgctggagtatct
agatttatggtagctgacacctcaaaggaagagaacactcccaaatttaaaaattcatgg
ttcaatcatgacaatatagtcacttgttctcgcgatgggagtgcgattatctggattccc
agatcacgaagatcacatggaaaagctggtcgttggacacgggcatatcatttgaaagtc
ccacctccaccaatgccgcctcagccttcccgaggaggccctcgccagaggattcttcca
actcctcgtggtgttaatatgattacctggagtcttgacaatcgctttgtccttgctgct
atcatggattgcagaatatgtgtgtggaatgcttctgatggtagcttggtgcattcactg
acaggtcatactgaatctacatatgtgctggatgttcatcctttcaaccccaggatagca
atgagtgctggctatgatggaaaaacaattgtctgggatatatgggaaggcatacctatc
cggacatttgaaacttcccactacaaattggtagatggaaagttctcaccggatgggaca
tcaattattctctctgatgatgttggccaattgtatatattggacagtggccaaggggag
tcccaagatgatgcacaatatgatcagttttttcttggtgattatcgcccactcattcac
gatagttttggaaatgttcttgaccaggaaactcagcttccagcataccggcggaatatg
caagatctactttgtgattcaggcatgataccgtatgaagaaccctaccagactgcatac
cagaagcggcggttaggagctctgggtgctgagtggcgtccttcctctctaagacttgct
gttgggcctgacttcagtctagatccggattaccaaatgttgcctttggcagacttggat
atattgactgagcctctgccagagtttttagatgcaatggattgggaaccagaaaatgga
atacgtagtgatgatacggattcagagtaccatattactgaagattattctactggaggg
gagcaaggaagtttaagttcaaatccctctatcgatccagagtgcagtgaagaaagtgag
gatgaggatgctgaaatggatggacttcgaagatcaaaaaggaaaaaacaaaaggctgac
aacgaagtcgtgacttcctctggtaggtgtgtcaaaagaaggaatttggatgagtgtgct
gccaattcatccagaagtaacagagcaaggaaatcaagacatggacgaaaagcttcaaga
aagaaatgttcctcatcattgagacctcaaagagctgctgcacgtaatgctcttagtcta
ttttctaagattactggaagatctgcagatggagaagatgaagatggatcggaagatgat
atgtcaggaagtgaatccccacttcaagattccaacattgagagtgatgaatctgataaa
caatatcagcaaggcaagcattcaaaaggaaaagaggttttactcgatgagtctgaagac
atggttaaacctattgaagagtttccggtaaatacggggagcaggaggagattggtgctt
aaattaccaagacaggagtcaaataagcttgtgtctagagaaagcacagtaaataatcgt
agtaatgaggatgatttggttgaccaatcatatagagtacctcaagaagcaaatgagaat
aatacaagtcctcaggatccaatgtcctccccaggtgacgaaaaatgcagcaaatttgaa
acagcagtgagtgggcagtcacagagagtagaaaatcatttaaatttcaaagggagaatt
agttggggagggtccagagcacgaacagcaaagcgccagagatcaggagaattcatgtca
ttggacgcacttgccagagccagtgcagttgttggtcacaatgaaaaagactacacaaaa
cctgaaaatgattctccttattcagaaagccaaaggttcagggataagatggacacagtg
gctatagggaatgagaaaaccactagggctagtacctccgatggccttaattgtgaagtc
aatgttaaagagcattcagattttagtgaatgcaaggatcatgatcaattgcctaaatct
gttcacatggctccttgggatgcaagcacttcctcttgccttgataaggatgggactggt
ttctctttcaaacaaaatgagaagttcatacctgtctcaacgaaattgaggtcgaggagg
atttcaagggatcctagtccttgcaaacatgaaattaactctgtggtagagaacatggaa
aatgataggacgatggaacagggtccagttgtgccagaggatgatggaacccataaattt
attccagatcatagatatgatggttcacgagaatcagacaatcaatctgataagaatgtt
attgctagcacacatgaatctgtcgaatccagtttacagaaaaacaaaatgttcagtgct
gtttatagaagggtgaaaccacataggggtagaagtaacttagaaggtgatagtggtgtc
aacggagaaggctgttcatatacttcaaatacaagcaaccacaatatcattgctggagac
attcaggatgacacaactgatggaggatgcaagacacggtccatggggttcaaggcatct
gcatgtgatccaagtagtccagatcatgatcctaagttggcggaaggacatgagccaggt
tatacattgaaccggaaaagttccatggataagtttcaacttgggaatgaagaacgggga
tcaagttcaaggacgaaagttggtttgaggtctactagaaacaggagaagcagttatctc
gacatgagtccaatggataaaaggaagccgcatcagtcaggaaagaaagtatcatggtta
atgttgtcagcgcatgaggagagctcaagatatatcccccagttaggggacaaagttgtt
tatctgagacaggggcatcaggagtatttcgatctgggtggattgagagaaaacccaccg
tggaggtttataaaggggagaataagagcggtcgaattttgcaatgttcaagagcttgag
tattcttcacgtgcagggtctggggatagctgctgtaaattgacgattcaatttgtagat
ccttcttctgatgtgtatggtaaatcttttaagatgactctgccggaagttactggtttc
ccagacttcattgttgaaagaactcgcttcgactcttccatggagagaaattggtcatgt
agggatcattgcaaagtctggtggaaaaatgagggcgaggatgacggtaagtggtggcat
ggcagggttaagtctaaacagtttaaatcgttggagttcccagacagtccttgggagatg
tacactgttcagtacaagagtgatcctagtgatgtacaactacatagtccttgggagctt
tttgatgaaattactcaatgggagccgcctcacattgatgataaaagcaaaaagaagctg
cattcggcctttgccaaactagagcgatcagccggaagtcgtcaggatccttttggggtt
gacaaactgatgcaacttcaacagaagccaaagtttacgaactggtgtgtggttccgata
tctcttgatgtgatccagtccaggttagagaacgactactatcgaagcctggaagcgctg
aagcatgactttaaggtcatgctggcaaatgctgaaacctatctcgagagcaacgcggtc
aaacgcgcatcagataaagagcttttagggaaactgaaatgcctatcagactggttcaca
cagacaatatcctccttgtag

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