KEGG   Malus domestica (apple): 103452849
Entry
103452849         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
mdm  Malus domestica (apple)
Pathway
mdm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103452849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103452849
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103452849
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Utp12 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st EIF3I Beta-prop_ACSF4 Beta-prop_EML Beta-prop_TEP1_2nd CFAP251_N Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_Vps41 WD40_Gbeta Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 PQQ_2
Other DBs
NCBI-GeneID: 103452849
NCBI-ProteinID: XP_008390605
LinkDB
Position
13:complement(join(12358688..12358831,12358938..12359012,12359625..12359736,12360158..12360237,12360366..12360529,12360795..12360962,12361256..12361805,12364774..12364862,12365656..12365810,12365943..12366058,12366158..12366301,12366388..12366477))
AA seq 628 aa
MASSNIRDLLTAFSPSLDLLAISSGDGRIKIWDTVKGQVQTEFTDIVASEDTSIYAKRER
GHLSVDYTCMKWFSSERKKKRKLGSSFLVLGTGGGNVLALDVAAGHLKWRVNDCHAGGVS
SISFARNASCIYTAGADGMICEIDSLTGNLSGKFKASTKAISSMSVSSDGKILATAAAQV
KIFNLSNHKKIQKFSGHPGAVRCLNFTEDGKYILSSAVGERYISVWSIAGGKKQSASAVL
KMEHPAVFVDSRCIDSGEVSDVGLYVLAISEVGICYFWFGQNIEELRNAKPTKISLSSED
ILSTTYKGALPTIFAAVFQGIAKAASGQVFVAYGSPVKPSFQKILVHSGTDIKLSSSHDG
VLLPMSQSLVKSKKRQNVQNRVIALGRANAEEALHPMPRIFDSHGKKKRHDKLSFDQDEE
MADLDDSRGHTGLVKSKDGMVELEADTAAICMEDRLRSLGIISKVDDHTFNSTLNSATFK
SIDLQTNMPQKKMRAAVLSLEPGDACKLLGVLVAMWQTRSSSGNNVLPWIYSILVNHSHD
IMSQKSETQMLSSLLKVTKSRGAAIQPLLQLSGRLQLVMAQIDKATHTKTQISSHTHEMN
ESEDEDDVNEIHYGEEGNDSEISSDDDQ
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggcctcgtcaaacatcagagacctcctgacggcgttcagtccgtctctggacttgttg
gccattagctccggcgacggtcgaatcaagatttgggatactgtgaaggggcaggtccag
actgagtttacagacattgtagcatcggaagatacaagcatatatgctaaacgagaaaga
gggcacctctcagttgattacacttgcatgaaatggttctcttccgaacgaaagaagaag
aggaagcttggttcctcatttttggttttaggaaccggtggcggcaatgttttggcgctt
gatgtggctgctggtcatttgaagtggagagttaacgattgccatgctggtggtgttagc
tccatatcatttgcaagaaatgcgtcgtgtatttacactgctggtgctgatgggatgatt
tgtgaaattgactctttgacgggaaacctgtcagggaagttcaaagcttccactaaggca
atctcctctatgtctgtttcgtcagatgggaaaatattagcaactgcggctgcacaagtg
aagattttcaatttgtctaaccacaaaaagatacagaagttttctggccatcccggtgct
gttcgctgtctgaacttcactgaagatgggaagtatatcctctcatctgcagttggtgaa
aggtatatttcagtgtggagtatagctggtggaaaaaagcagtctgcaagtgctgtcctt
aaaatggagcaccctgctgtcttcgtagatagcaggtgtatagacagtggggaagttagt
gatgtaggtctatatgtattagcgatttcagaagttggcatttgttacttttggtttgga
cagaatattgaagaactacggaatgcgaagcctacaaaaatttcactatcttctgaagac
attttgtctacaacatacaagggtgcattacccacaatatttgctgcggtttttcaagga
attgcgaaagctgcttctggtcaggtatttgtcgcttatgggtcgccagtgaagccatca
ttccagaaaattttggtgcattctggaacagacataaagttgagtagttcccatgatggg
gttcttctaccaatgagtcagtcccttgtcaaatctaagaaacgacaaaatgtacaaaat
agagttattgcattaggtcgtgcaaatgcagaagaagccttgcatccaatgccaaggatt
tttgattcacatgggaaaaagaaaagacacgataaattgagttttgaccaagatgaagaa
atggctgatttggatgacagcaggggtcacactggccttgtgaagagcaaagatggcatg
gtagaacttgaagctgacactgcagcaatttgcatggaggacagactgagatcattaggg
ataattagtaaagtagatgaccatacattcaactctacacttaattctgcaacatttaag
agtattgatcttcagactaatatgccacagaagaagatgagggcagctgtactgtcatta
gaacctggtgacgcatgcaaattattgggagtccttgtggccatgtggcaaacaaggtct
agcagcgggaataatgttcttccatggatttacagcatattggtaaatcacagtcatgat
atcatgtctcaaaagtctgaaacccagatgcttagctccttgttgaaggttaccaaatcc
agaggggcagctattcagcctttattacaattatcaggtcgtttgcaacttgtgatggca
cagattgacaaggcaacccacacaaaaactcaaatttcatcgcacacacatgaaatgaat
gaaagcgaagatgaggatgatgtaaacgaaattcattatggggaagaaggcaatgattct
gagataagcagtgatgatgatcagtag

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