Malus domestica (apple): 103453336
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Entry
103453336 CDS
T03194
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103453336
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103453336
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103453336
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103453336
Peptidases and inhibitors [BR:
mdm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103453336
Ubiquitin system [BR:
mdm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103453336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103453336
NCBI-ProteinID:
XP_008391098
LinkDB
All DBs
Position
13:complement(join(42260737..42260974,42266794..42269486))
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AA seq
976 aa
AA seq
DB search
MGKKVKKKARAPPREKLVAADSPKKAPQPCNPSVKDGDNGVSVAKERRPCPHVDKGVNLD
KLSAKIGSSGPVRCEYCREGALDRRGGKGKGKHGKKKGSSSVDSKSESKAIWVCLECGHY
SCGGFGLHTTPQCHAVRHARQTQHPIVIHFEKPQMRWCFPCKMLITIDKTEEDGEQKDVF
ADVVKLIKGHSSEESLVNAEDVWFVSGSVTSEIKSASNISCDLDGRVGYTVRGLVNLGNT
CFFNSVLQNLLAMDRLRGYFLNLDASTGALTVSLKKLFTEAKPESGVKNVINPRSLFGCL
CSKAPQFKGYQQQDSHELLHCLLDELCIEELSTRKRINSSQENGNPSNSGPTFVDTAFGG
QIASTVRCVECGHSSTVYESFLDLSLSVPTRKSPSKTAQPTSRTKKMKLPPKKSGKFRSK
NNEEKNSVPSPSVPTPSTSSEVSEQKELVVNSLSAVQESADDVCEDAAEQTSPLLDDCSW
LDYLDSGNMLDDNDLSSQHNDISIVQDSEKKNTHLNDVSLQSGSESSNQVFTPNGEPNVK
PDFSSVNSREEELPLQVLDSEVLLLPYKAECSITEEIMGGEGEASSLVVGCGQDDFGFGD
LFNEPEVYGPPRRPSVGEGGTDTSIIASESDPDEVDDTVSPVSVESCLAHFIKPELLASE
NAWHCENCSKTLPSQKLEEKKQVKSAARVLLNGCETRTQSDSLSLNTGPWPADVRTLGNG
NVKSNTGCNQFGENLILHDGKINCLSQNCSAVENGQSHKLNSVVCRRQDEIKDAPPVQSN
TSDCNNACSLESFSDQVIDSRADESRSASFTSDTVPQTNDGILDGHRESEESEDEEINAK
RVNLKRNATKRYLINRAPPILTIHLKRFSQDARGHLSKLNGHVSFREKFDLRPYMDSSST
DGEKYEYQLLGVVEHSGTMRGGHYVAYVRGGERGRGKAEKENIGHMWYYASDAHVRQVSL
DEVLRSDAYILFYEKV
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagttaagaagaaggctagagctcctccaagggagaagttggttgcagcc
gattccccaaaaaaagctccccaaccatgcaacccaagtgttaaggatggtgacaatgga
gtttcagttgcgaaagagagaaggccttgtcctcatgttgacaaaggtgtaaatttggat
aaattgtctgctaaaattgggtcttcaggacctgttaggtgtgaatattgcagggaagga
gcgcttgataggaggggtggtaaaggaaagggaaaacatgggaagaagaaagggagctcg
tccgtggattcaaaatcggagtccaaagccatttgggtttgtttggagtgtggtcattat
tcttgcggtgggtttggacttcatacaacccctcaatgccatgcagttcggcatgctagg
caaactcagcacccaatagtgatccactttgaaaagccgcagatgcgatggtgcttcccg
tgcaaaatgcttattacaattgacaagacagaagaggatggtgaacaaaaagatgtgttt
gcggatgttgttaaattgataaagggtcattcatcggaggaatcattggttaatgctgag
gatgtgtggtttgtgagtggcagtgtgacaagcgaaatcaaatcagctagcaatatatca
tgtgatttggatggaagagttggttatacagtgagaggcttggttaatcttggtaacact
tgcttctttaattctgtcttacagaaccttctagccatggataggttgcggggctacttc
ttaaatttagatgcatctactggagctcttactgtttccttgaagaaactctttactgaa
gcaaaaccagagtcaggagttaagaatgtgataaacccaaggtcactttttgggtgtctt
tgttccaaggctccccaatttaaggggtatcagcagcaagacagccatgaattgcttcat
tgcttactggatgaattgtgcattgaggagttgagtacgaggaaacgtataaattcttct
caggaaaatgggaatccttcaaattcaggtcctacttttgtggatactgcatttgggggc
caaatagcaagtacagttcgctgtgtcgaatgtggtcactcctcaactgtgtacgagtca
tttttagatctgtcattgtcagttccaaccagaaaatccccatctaagactgcccaaccc
acctctcgaacaaagaagatgaagttgccgcccaagaagagtggaaagtttcggtctaaa
aataacgaagagaagaattctgtaccatcaccaagtgttccaaccccatcaaccagcagt
gaggtttctgaacaaaaggaattagttgtaaatagtctatctgctgtccaagaatctgca
gatgatgtctgtgaggatgcagcagagcaaacatcacctttgttagatgactgttcatgg
ttggattatcttgattcgggaaatatgttagatgacaatgatttatcttcgcaacataat
gatatttcaattgttcaagattctgaaaaaaaaaatacacatcttaatgatgtctcttta
cagagtggctctgaatctagtaatcaggtttttacgcctaacggggaaccaaatgtaaaa
cctgacttttcttcagtgaattctagggaggaagagctcccattacaggttctggattct
gaagttttgttgcttccgtataaagcagagtgttctatcactgaggaaatcatgggaggc
gaaggtgaggcctcctccttggttgtgggttgtggacaagatgactttggctttggggat
ttattcaacgaacctgaagtttatggcccccctagaagaccctctgtaggtgagggtggc
acagatactagtatcatagctagcgagtctgatccagatgaagttgatgatactgtttct
ccagtgtctgtagagagttgtttggctcatttcataaagcctgagcttcttgccagtgaa
aatgcttggcattgtgagaactgttccaaaactcttccaagccaaaagttggaagaaaag
aagcaggtaaaatctgctgctagagttttgttaaatggatgtgagactagaacacaaagt
gattcactgagtttaaatacgggtccgtggcctgccgatgtcagaacgcttggtaatggg
aatgtcaaaagcaatactggttgtaaccagtttggtgaaaacttgattttgcatgatgga
aaaataaattgcttgagccaaaattgctcagcagttgagaatggtcaatcacataagttg
aattctgttgtttgtcgacgacaagatgagattaaagatgctcctccagtgcaatcaaat
acttcagattgcaataacgcttgcagcctagaaagtttcagtgatcaagtcattgattct
agggctgatgagtctagaagtgctagtttcacctctgacactgtaccgcagactaatgat
gggatattggatggacatcgtgaatcagaagaaagtgaggatgaggaaataaatgccaaa
cgtgtgaatttgaagaggaatgcgactaaaaggtacctcatcaacagggccccaccgatt
ttgactattcatctcaagaggttcagccaagatgctcgtggtcacttgagtaaattgaat
ggccatgtcagttttcgagaaaaatttgatcttaggccatatatggattccagttccaca
gatggggagaagtatgaataccagctattgggggttgtggagcattctggaaccatgaga
gggggccactatgttgcatacgtgagagggggtgaaaggggcagaggaaaagctgagaaa
gaaaatatcggtcatatgtggtattatgctagtgatgcacatgtgcgtcaggtttcccta
gatgaggttcttcgctctgatgcctatatcttattctatgaaaaagtttga
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integrated database retrieval system
