Malus domestica (apple): 103453401
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Entry
103453401 CDS
T03194
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
mdm
Malus domestica (apple)
Pathway
mdm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103453401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103453401
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103453401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Ribonuc_P_40
InlK_D3
Motif
Other DBs
NCBI-GeneID:
103453401
NCBI-ProteinID:
XP_008391163
LinkDB
All DBs
Position
13:join(18659893..18660177,18660283..18660411,18661060..18661182,18661614..18661856)
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AA seq
259 aa
AA seq
DB search
MEAPTPKHTCLKLDLQESQQPIFVKGTWFPSRFELSITDGRNAWICSASEDQVSDRAAQW
DQPVSEYVALAERYLGFQHPDSVYGFADAGDGYKRLSWTFEKEGTKLEWRWKCQPSPNSK
QTTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEKCLAQSEKITNEKIEFESAIYAKF
LGVLNSKKAKLRELRDKLSNKEVAGKLPEEEEASSEQTEPYVSGDDKSEEEFLKDYPATS
KDAPTIRSRGRGRKRGTHK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccccacccccaaacacacgtgcctaaagctcgatctccaagaatcccagcaa
ccaatcttcgtcaagggcacgtggttcccctcccgcttcgaactctccatcaccgacggc
cgcaacgcctggatctgctccgcctccgaagaccaggtcagcgaccgtgccgctcagtgg
gaccagccggtctccgagtacgtggcgctggccgagcgctacttagggtttcagcaccct
gactccgtatacgggttcgccgacgccggcgacggctacaaaagactttcatggacgttt
gagaaggaagggacgaagctcgaatggcggtggaaatgtcagccgtcgccaaacagtaag
caaaccacggcggcggtgttggattttctcatggatgcaaatgttgggctaagtgaagaa
gttgtgagaaaaactcaatcgtttgagaggttgaaagtggaagctgagaagtgtctagca
cagagtgagaagattaccaatgagaagatagaatttgagtccgctatttatgcaaagttt
cttggcgtcttgaattcaaagaaagctaaactaagagagctccgagataagctttcaaac
aaagaggttgctgggaaactgccagaagaagaggaagcaagttcagaacaaactgaacct
tatgtcagtggcgatgacaaaagcgaggaagaatttttgaaagattatccagctacctcc
aaggatgctccaaccattaggtctcgaggtagaggtcgaaagaggggaacgcacaagtag
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