Malus domestica (apple): 103453448
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Entry
103453448 CDS
T03194
Name
(RefSeq) cryptochrome-1-like isoform X3
KO
K12119
cryptochrome 2
Organism
mdm
Malus domestica (apple)
Pathway
mdm04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103453448
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
103453448
NCBI-ProteinID:
XP_008391195
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Position
13:complement(join(19630014..19630039,19630390..19631062,19631143..19631855,19631958..19632179,19632793..19633102))
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AA seq
647 aa
AA seq
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MSGDKTIVWFRRDLRIEDNPALAAAARDGSVFPVYIWCPKEEEQFYPGRVSRWWLKQSLA
HLDQSLKSLGAELVLIKTQSTLAALIECIQAIGATKVVFNHLYDPVSLVGDHNIKGKLVE
LGISVQSFNADLLYEPWEVYAGKGQAYTTFKVYWDKCLHIQRELVTRLPPWKLISATVIG
TVAKCSLEELGLENETEKSSNALLRRAWSPGWSNADKALSEFFELHLLDYSNNRMKVGQN
STSLLSPYLHFGELSIRKVFQSARMKQILWAKEGNSTGEESVTLFLRAIGLREYSRYLCF
NFPFTHERPLLSNLKFFPWQADQANFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIV
SSFAVKVLLLPWRWGMKYFWDTLIDADLESDILGWQYISGSLPDGHELERLDSPEVQGSK
FDPEGEYVRHWLPELSRLPTEWIHHPWDAPDSVLKVSGVEFGFNYPKPIIEIDLARERLT
SAIFKMWEMEAAAKAASSNGTDEVVVDNSISEDLPIPKVILKKTSPCPTYSSNDQKVPTC
QNSKNNQFIRKRSKFMQDESPLPDNPHNPNEAGPSRTNEDTSSTAESSISKKQTTSRNSF
SVPQSCSSSEGNPLMGCESSEMKQSWQEQSDMEQSSSKNGAVEDEHL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgataagactatagtttggtttaggagggacctgaggattgaggacaatcct
gccttagctgctgctgctagggatggtagtgtttttcctgtttatatttggtgccccaaa
gaggaagagcaattttacccaggtcgagtatcacggtggtggctgaagcagtctcttgct
catttggaccaatccctgaaatcccttggggcagaacttgtgcttatcaaaactcagagt
actcttgctgctctcatcgagtgtattcaagccattggagctaccaaagtagttttcaac
catctttatgatcccgtttcacttgttggtgatcacaacatcaaaggaaagctggtggag
ctaggcatttctgtgcaaagcttcaatgcagatctgttgtatgagccatgggaagtatat
gctggaaaaggacaagcttatacaactttcaaggtgtactgggataagtgcttacacata
caacgggaacttgtgacacgtcttcctccatggaaattgatttcggcaacagtgataggt
actgtagcaaaatgttcactcgaggaactgggtctcgaaaatgaaacggaaaagtctagc
aatgccctcctaagaagagcatggtctcctggttggagcaatgctgacaaggcactaagt
gaatttttcgagttgcacctgcttgactactcaaacaacaggatgaaggttggacaaaac
tccacatcacttttgtccccatatcttcacttcggagaactgagcattaggaaagttttc
caatcagctcgaatgaagcagatactgtgggcaaaagaagggaactctactggggaagag
agtgtgacactttttctgagggccattgggcttagagaatactcacggtatctatgtttt
aacttcccgttcactcatgagagaccactgctgagcaacttgaagttttttccatggcaa
gctgaccaagccaattttaaggcttggagacaaggtcggaccggttaccctttggttgat
gcaggaatgagagagctatgggcaactgggtggatacacaacaggataagagtgatcgtt
tcaagttttgctgtgaaagtgttgcttcttccttggagatggggaatgaagtatttctgg
gatacgcttatagatgccgatttggaaagcgatatccttggttggcagtatatctctggg
agtttaccagatggccatgagcttgagcgtttggacagtccagaggttcagggctcaaaa
tttgacccagagggtgaatatgtaaggcattggctgcctgagttatcacgtttgccaacc
gagtggatccaccatccttgggatgcacctgattctgtgcttaaagtttcaggtgtagag
tttgggtttaactatccaaaacctatcattgagatagatttggctagagaacgcttgacg
agcgccatattcaagatgtgggaaatggaagcagcagcaaaggctgcaagctcaaacggc
acagatgaagttgttgttgacaactccatcagtgaagatttgcccatcccaaaggtgata
ttaaagaaaacctctccttgccctacatactcctctaatgatcagaaggtaccgacatgt
caaaattccaagaataatcagtttattaggaagagatcaaaatttatgcaagacgaaagc
ccactcccagataatccgcacaatcctaacgaagctgggccctcgagaacaaatgaagac
acgagctctactgctgaatcttcaatctctaagaagcagacaactagcagaaattcattt
tcggttccacagtcatgttcatcatcagaaggcaaccccttaatggggtgtgaatcttct
gagatgaagcagtcatggcaagaacaaagtgatatggagcagagttcaagcaaaaatgga
gccgtggaagatgaacacctctga
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