KEGG   Malus domestica (apple): 103453561
Entry
103453561         CDS       T03194                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
  KO
K10752  histone-binding protein RBBP4
Organism
mdm  Malus domestica (apple)
Pathway
mdm03082  ATP-dependent chromatin remodeling
mdm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103453561
   03083 Polycomb repressive complex
    103453561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103453561
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     103453561
  Histone modification proteins
   HAT complexes
    HATB complex
     103453561
   HDAC complexes
    Sin3A-HDAC complex
     103453561
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     103453561
    PRC2.2
     103453561
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     103453561
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103453561
  Chromatin remodeling factors
   NuRD complex
    103453561
   NuRF complex
    103453561
   NuRF complex (fruit fly)
    103453561
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_RIG_2nd EIF3I WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N ANAPC4_WD40 WD40_RFWD3 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 103453561
NCBI-ProteinID: XP_008391324
LinkDB
Position
09:join(16778957..16779078,16779465..16779528,16779944..16780030,16780122..16780184,16781103..16781168,16781322..16781396,16781696..16781771,16782037..16782244,16782452..16782533,16782747..16782820,16783020..16783131,16783247..16783321,16783940..16784007,16784269..16784368,16784493..16784588)
AA seq 455 aa
MKGKATEASVNDRYTQWKSLVPVLYDWLVNHNLVWPSLSCRWGPQLEQATYKSRQRLFLS
EQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELP
QNSKIVATHTDSPDVLIWDIEAQPNRHAVLGASDSRPDLLLTGHQDNAEFALAMCPSEPF
VLSGGKDKSVILWSIHDHISSLASEPGSGGGSAKHSSKTGGSNDKLRDSPSVEPRGVYKG
HEDTVEDVQFCPSSSQEFCSVGDDSCLILWDTRAGSSSAVKVEKAHDADLHCVDWNPHDV
NLILTGSADNTIRLFDRRYLTSGGVGSPVHTFEGHNAAVLCIQWSPHKASVFGSSAEDGL
LNIWDHEKVGKNGSKPSNAPPGLFFRHAGHRDKVVDFHWNASDPWTISSVSDDCGSTGGG
GTLQIWRMIDLIYRPEEEVLAELDTFKSHLTTCQA
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaaagggaaagctacggaggcgtcggtgaacgatcgatacacgcagtggaagtcgctg
gtgccggtgctctacgactggctcgtcaatcacaaccttgtttggccttctctctcttgc
agatggggaccgcagctggagcaagccacttacaagagtcgtcagcgcctttttctttcg
gaacagactgatggcagtgttccaaatacacttgtcattgcaaactgtgaagttgtcaaa
cccagggttgcagctgccgagcacatatcacagttcaatgaagaagcacgctctcccttt
gtgaaaaagtataaaactattatacatcccggtgaggtgaacagaatcagggaactccct
cagaatagtaagatagtggcgacacacactgacagtcctgatgttctcatttgggatatt
gaggctcaacctaatcgccatgctgttctgggagcttcagattctcgtccagatctgcta
ttgacagggcatcaagataatgctgaatttgctcttgccatgtgcccatctgaacccttt
gtgctctctggagggaaggataaatcagtgattttgtggagtattcatgatcatatctca
tctttagcatcagaaccaggatctggaggtggcagtgctaaacattcttctaagactggt
gggagtaacgataaactcagagacagcccttctgttgagccacggggtgtctataaaggg
catgaggatactgttgaggatgtgcagttctgcccatctagttcgcaggagttctgtagt
gtaggcgatgattcttgcctcatactatgggatacaagagctggatctagttcagctgtc
aaggttgagaaagctcatgatgctgaccttcattgtgttgattggaatccacatgacgtc
aatctcatacttacagggtccgctgataatactattcgcttgtttgaccgccgatatctc
acttctggaggagttggatcacccgttcatacatttgagggccacaatgcagctgtcctc
tgtatacagtggtctcctcacaaggcatctgtttttggaagctctgccgaggatggctta
ctaaacatctgggatcatgaaaaggttggcaagaatggatcaaagccgtcaaatgctcct
ccaggattgttctttcgacatgctgggcatagggacaaggttgttgactttcattggaat
gcgtctgatccgtggacgatatctagcgtctctgatgattgcggaagtaccggaggtggt
ggtaccctccagatatggcggatgattgatttgatttacaggcccgaggaagaggtcctc
gcggagctggatacgttcaaatcgcacctaacaacgtgccaggcgtga

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