KEGG   Malus domestica (apple): 103453565
Entry
103453565         CDS       T03194                                 
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103453565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103453565
   03110 Chaperones and folding catalysts [BR:mdm03110]
    103453565
   03029 Mitochondrial biogenesis [BR:mdm03029]
    103453565
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103453565
Enzymes [BR:mdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     103453565
Messenger RNA biogenesis [BR:mdm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     103453565
Chaperones and folding catalysts [BR:mdm03110]
 Heat shock proteins
  HSP60 / Chaperonin
   103453565
Mitochondrial biogenesis [BR:mdm03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    103453565
Exosome [BR:mdm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103453565
  Exosomal proteins of other body fluids (saliva and urine)
   103453565
  Exosomal proteins of breast cancer cells
   103453565
  Exosomal proteins of colorectal cancer cells
   103453565
  Exosomal proteins of bladder cancer cells
   103453565
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 103453565
NCBI-ProteinID: XP_008391328
LinkDB
Position
09:complement(join(16640335..16640440,16640531..16640609,16641030..16641135,16641232..16641335,16641418..16641517,16641592..16641687,16641979..16642056,16642128..16642196,16642278..16642358,16642609..16642698,16642817..16642903,16643258..16643362,16643470..16643565,16643991..16644166,16644290..16644449,16644730..16644861,16645270..16645329))
AA seq 574 aa
MYRIASKLASSVASSTSRKLVGSRVISNRNYVAKDISFGVGARAALLQGVSEVAEAVKVT
MGPKGRYVIIENTHKDPQVTKDGVTVAKSISFKGKYKNVGADLVKQVAKATNTAAGDGTT
CATVLTQAILIEGCKSIAAGVNAMDLRIGINAAVDAVVTDLKSRALMISTPDEITQVATI
SANGEQEIGELIAKAMEKVGKEGVITVADGNTLDNELEVVEGMKLGRGYISPYFITDPKT
QKCELENALILICEKKISDLNSLVKILELAVNKNRPLLIVAEDVEGDPLAMLILNKHHAG
VKVCAIKAPGFGENRRASLDDLAVFTGGEVVSEDRGLTLDKVKYETLGYAKKVTVSLDDT
IILHGGGDKKLIEERCEELRTAMDKSDAMFDKEKAQERLSKLSGGVAVFKVGGVSEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYATKSLENLHMQNEDQRRGVQIIQNALKAP
TFTIVSNAGFDGALVIGKLLEQDDLKMGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAAS
VSLLLTTTEAAVVDNPDQKKPPSRVPDMDALGGY
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgtatcgaatagcttcaaaattagcttcctccgtcgcttcctctacttccaggaaactg
gtgggcagtagggttataagcaataggaattatgtggcaaaagatatcagtttcggggtt
ggggctcgtgccgctttgttgcaaggtgtctctgaggttgccgaggctgtcaaagttaca
atgggaccaaagggtcgctatgtgattattgagaacactcataaggatcctcaggtcacc
aaggatggggttactgttgcaaaaagcattagtttcaaggggaagtacaagaatgtgggt
gcagatcttgtgaaacaggttgctaaagctactaatactgctgcaggagatggtacgact
tgtgcaactgtcctgacccaggcaattctcatagaaggttgcaagtcaatagctgctggg
gtaaatgcaatggatttgcgcattggtatcaatgcggcagttgatgctgttgttaccgat
ctgaaaagcagagcattgatgataagcacaccggatgagattacacaggttgcaactatt
tctgcaaatggtgaacaagagattggagaactgatagcaaaagcaatggaaaaagttggg
aaggaaggagtcattactgttgctgatgggaacactttggataatgaattggaagtggtg
gaagggatgaagctaggcagaggttatatttctccttattttatcaccgacccaaagact
cagaaatgtgaactggaaaatgcactgatcctcatttgtgagaagaaaatttcagacctg
aattcacttgtgaaaatactagagctggcagtaaataaaaatagaccacttcttattgtg
gccgaggatgtcgaaggtgatccacttgctatgcttatactcaacaaacatcatgctgga
gttaaggtttgtgccatcaaagctcccggttttggggaaaacaggagagctagtttagat
gatctcgccgtttttactgggggagaggttgtcagtgaagatcgtggtttgactcttgac
aaagtcaaatatgaaacgcttggctatgcaaaaaaggtgactgtctctcttgacgacaca
atcattctacatggaggaggggataagaagctgattgaagaaagatgtgaggagttgaga
acagcaatggacaagagtgatgccatgtttgacaaggagaaagcacaggagcggctatca
aagctatctggtggagttgccgtcttcaaggttggaggggtcagcgaggcagaggttggg
gagaggaaagatagggtaaccgatgctttgaatgctacaagagcagccgtggaagaggga
atagtgccagggggcggtgttgctctcttgtatgctacaaaatctttggagaaccttcac
atgcaaaatgaagaccaaagaagaggagtacaaataatccagaatgctcttaaggcgccc
acgttcactatagtttcgaatgctggttttgatggtgcacttgttattggtaaattgttg
gaacaagatgatcttaaaatgggttacgatgctgccaaaggcgaatatgttgacatggtg
aaggctggaatcatagatcctctaaaagtcatcagaaccgccttggtagacgctgccagc
gtctcgttgctattgacgacaacggaggctgccgtggtggacaatccagatcagaagaaa
cctcctagccgtgtccctgatatggatgctttgggaggatattga

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