Malus domestica (apple): 103453678
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Entry
103453678 CDS
T03194
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
mdm
Malus domestica (apple)
Pathway
mdm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103453678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103453678
03036 Chromosome and associated proteins [BR:
mdm03036
]
103453678
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103453678
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103453678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
103453678
NCBI-ProteinID:
XP_008391466
UniProt:
A0A498JG98
LinkDB
All DBs
Position
08:join(28184062..28184118,28184242..28184328,28184564..28184641,28185479..28185669,28185795..28185936,28186420..28186500,28186999..28187127,28187860..28187937,28188118..28188189,28188708..28188788,28188878..28188925)
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AA seq
347 aa
AA seq
DB search
MSNFMAASNPNTNPNKSFEVTPPPNDSISSLSFSPKSNILVATSWDNQVRCWEIHQSGQN
LASVPKASISHDQPVLCSTWKDDGSTVFSGGCDKQVKMWPLAGNQPVTVAMHEAPIKEIA
WIPEMNYLVTGSWDKTLKYWDLRQQTPIHTQPLPERCYTLSVRYPLMVVGTADRNLIVFN
LQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGLQSKNFTFKCHR
EGNEIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMARCSQPIPCSAFNSDGS
IFAYAVCYDWSKGAENHNPATAKNYIYLHVPQEAEVKGKPRINAGKR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttcatggctgcttccaatccgaatacgaatccgaacaagtcatttgaggtc
acccctccaccgaacgactcgatatcaagcctaagcttcagtcccaagagcaacattctg
gtcgccacctcctgggataaccaggtgcgatgctgggagatacaccagagtggacaaaat
cttgctagtgtgcccaaggcatccatatcccatgaccaaccggttttgtgctcaacctgg
aaggatgatggatcgacagtgttctccggagggtgcgacaaacaagttaagatgtggcct
ttggctggtaaccaaccagtgaccgttgccatgcatgaagcacccataaaagagattgca
tggatcccggagatgaactacttagtcacaggaagctgggacaagactttgaagtattgg
gatctgaggcagcaaactccaatccatacccaacctctacctgagcgctgctacactcta
tcagtgagataccctctaatggttgttggcactgcagacagaaatctgattgtttttaac
ttgcaaaacccacagacagaattcaagagaattgtttcacccctaaagtatcaaacaagg
tgtgttgctgcatttcctgatcagcaaggattcttggttggttctattgaagggagggtt
ggtgtacatcatctggatgatggactacaaagtaaaaactttaccttcaagtgccataga
gagggcaatgagatatactcagtcaactctctgaacttccatccagtccatcacacattt
gctaccgctggttctgacggttctttcaatttttgggataaggatagcaaacagagacta
aaggcaatggcaaggtgcagtcaacctattccttgcagtgctttcaacagtgatggttcc
atatttgcatacgcagtttgctatgattggagcaagggcgctgaaaatcataatcctgct
actgcaaagaactacatttacctccatgtgccccaggaagctgaggttaaaggcaagcca
agaatcaacgctggaaaacggtga
DBGET
integrated database retrieval system
