KEGG T03194: 103453747

Malus domestica (apple): 103453747

Entry

103453747         CDS       T03194

Name

(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1

K11838

ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]

Organism

mdm Malus domestica (apple)

Pathway

mdm03083

Polycomb repressive complex

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103453747
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mdm01002]
    103453747
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103453747
Enzymes [BR:mdm01000]
3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103453747
Peptidases and inhibitors [BR:mdm01002]
Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103453747
Ubiquitin system [BR:mdm04121]
Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103453747

SSDB

Motif

Pfam:

USP7_ICP0_bdg USP7_C2 UCH MATH_2 MATH UCH_1 ubiquitin

Other DBs

NCBI-GeneID:

103453747

NCBI-ProteinID:

XP_008391535

LinkDB

Position

14:complement(join(4729182..4729223,4729340..4729426,4729526..4729600,4729718..4729834,4730001..4730087,4730323..4730388,4730802..4730867,4731172..4731243,4731334..4731435,4731555..4731732,4731831..4731886,4731976..4732086,4732206..4732274,4732446..4732554,4732640..4732728,4732843..4732920,4733420..4733542,4733649..4733768,4733879..4733959,4734032..4734178,4734274..4734352,4734755..4734829,4735597..4735706,4736213..4736311,4736601..4736716,4736811..4736919,4736998..4737216,4737317..4737582,4738404..4738561,4738663..4738810,4739035..4739107,4739335..4739364))

AA seq 1118 aa
MTMMTPAPLDQQQQEDEEMLVPHSDVVEGPQPMEVAQVEPASTVDSQPVEDPPTMKFTWT
IENFTRLNTKKHYSDTFVVGGYKWRILIFPKGNNVDYLSMYLDVADSGTLPYGWSRYAHF
SLAVVNQIHTKYSIRKDTQHQFNARESDWGFTSFMLLGDLYDLSRGYLVNDTVVVEAEVA
VRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSG
SIPLALQSLFYKLQYNDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPDSDKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
VKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAE
HLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLTEQIGRDIYFDLVDHDKVHSFRI
QKQMPFNVFKEEVAKAFGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEETQSVGQLREVSN
KTNNAELKLFLEVAFGLDLRPIPPLDKTKEDILLFFKLYEPEKRELRFVGRFFVKSSSKP
AEILGKLNQLAGFAPEEEIELYEEIKFEPCIMCEHLDKKTSFRLSQIEDGDIICFQKSTP
LKSEEECKYPDVPSFLEYVHNRQVVHFRSLEKPKEEDFSLELSKQHTYDDVVEKLARQIG
LDDPTKIRLTAHNCYSQQPKPQPIKFRGVEHLTDMLVHYNQSSDILYYEVLDIPLPELQG
LKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINVLKTKVELSHPNAELRLLEVFYHKIY
KIFPHGEKIENINDQYWTLRAEEIPEEEKNLGLHDRLIHVYHFTKDTAQNQMQVQNFGEP
FFLVIHEGETLAEVKERIQKKLQVPDEEFTKWKFAFLSLGRPEYLQDSDVVSSRFQRRDV
YGAWEQYLGLEHSDNAPKRAYAANQNRHTYEKPVKIYN

NT seq 3357 nt +upstreamnt +downstreamnt
atgactatgatgacccctgcaccattagatcagcagcagcaagaggacgaagagatgctt
gtgccgcactcggatgtggtcgaaggccctcagcctatggaagtagcccaagtggagcca
gctagtacagttgatagtcagccagtggaggatcctccaacgatgaaattcacttggaca
attgagaattttactaggttgaacaccaagaagcactactctgacacgttcgttgttggc
ggctataaatggcggatattgatatttcccaagggaaacaatgtggactacttgtcaatg
tatttggatgtggcagattctgggacattgccatatggatggagtagatatgcgcacttc
agcttggctgtagttaatcagatccataccaagtactcaataagaaaggacacacaacac
cagttcaacgcaagagaaagtgactggggattcacttccttcatgcttcttggtgatctc
tatgacctgagtaggggatatctggtgaacgatacagttgtggttgaagctgaggttgct
gtccgtaaggttcttgattactggtcatatgactcgaaaaaggaaactggttatgttggg
ctcaagaatcagggagcaacttgttatatgaattctcttctccagactttgtaccatata
ccgtacttcagaaaggccgtgtatcatatgccaacaactgagaatgacatgccttcagga
agcattcctttggcactacaaagtttgttctataagcttcaatacaatgacagcagtgtt
gcaaccaaagaattgaccaagtcctttggatgggatacatatgattcttttatgcaacat
gatgtgcaggaacttaatagagttctttgtgaaaagcttgaagataaaatgaagggaact
gttgtggagggtacaatacagcagttgtttgaaggacatcacatgaattacattgaatgc
atcaatgtggactacaaatctacaagaaaagaatcattttatgacctccagcttgatgtg
aaaggctgccgggatgtttatgcttcatttgacaagtatgtggaagttgaacgtctagag
ggtgacaataaataccacgccgaagaacatggtttacaggatgctaagaagggtgtccta
tttattgacttccctcccgttcttcaacttcagttaaagcgatttgagtatgattttatg
cgggacacaatggttaagataaatgatcgctatgaatttcctctccaacttgaccttgat
agggagaatggaaaatatctatcacctgactcagataagagtgttcgcaacctctacacc
cttcatagtgtcttggttcatagtggtggggtgcatggtggacattactacgctttcatc
agaccaaccctctctgaccagtggtacaaatttgatgatgaacgtgtgacaaaagaggat
gtgaagagggctttagaagagcagtatggtggtgaggaagagttgccacagaccaatcct
ggcttcaataatactcctttcaaatttacaaagtactcaaatgcatacatgcttgtgtat
atacgggatagtgataaggacaaaataatatgtaacgtggatgagaaggacatagccgaa
catctaaggataaggttgaagaaagaacaagaagagaaagaggacaaaaggagatataag
gcacaagcacacctctatacaattattaaggttgctcgagatgaggatctgacagaacaa
attggaagggatatttattttgaccttgtggaccatgacaaagttcatagtttccgtatt
cagaaacaaatgccctttaatgttttcaaggaggaggttgcaaaagcgtttggcatacca
gtgcagtttcagcgtttctggatttgggccaagagacaaaaccacacatatcgccccaat
cgaccattgacacctcaggaagaaacacaatcggttggacaattgagagaggtatcaaat
aaaacaaacaatgcagagctaaagctgtttttggaagtagcatttgggctggatctacgt
cctattcctccgcttgacaaaaccaaggaagatattcttcttttctttaagctttatgag
cctgagaaacgagaactacgttttgttggtaggtttttcgtgaagagttctagtaagcca
gcagagattttaggaaaattaaatcaactggctggttttgcccctgaggaagaaattgaa
ctttatgaggaaattaagtttgagccttgtatcatgtgcgaacaccttgacaagaagacc
tcatttcgattaagtcagattgaagatggggatattatttgctttcagaagtctactcct
cttaaaagtgaagaagaatgtaaatatcctgatgttccttcgtttttggaatatgtacac
aatcgccaggttgttcatttccgttctttggagaaacctaaggaggaggatttcagttta
gaattgtcaaagcaacacacttacgatgatgtggtggagaagttggctcgccaaattggt
ttggatgatcccaccaaaatcagactcactgcacataactgctattctcagcaacctaag
ccccaaccaattaaatttcggggagtagagcatttaactgatatgttagttcattacaat
caaagctctgatattttgtattatgaagtcttggacatccccctgccagaattgcaaggc
ctaaaaaatctaaaagttgcttttcatcatgctacaaaagatgaggtggtgattcacaat
attagattgcccaaacagagcactgtaggggatgtgattaatgtacttaaaacgaaggta
gaactgtctcatccaaacgcagaactccgactgcttgaggttttctatcacaagatctac
aagatcttcccacatggtgagaaaattgagaatataaatgaccagtactggactttgcgt
gcagaggagattccagaagaagagaaaaacttgggtctccatgatcgcttgattcatgtt
taccactttacaaaggacactgcacagaaccagatgcaagtacaaaattttggggaacct
ttcttcttggtcatccatgaaggtgaaactttagctgaagttaaagaacggatacaaaag
aaattgcaggtccccgatgaggagttcaccaagtggaagtttgcattcttgtcacttggt
cgtccagagtacttgcaggattctgatgttgtttccagccgttttcagagaagagatgtt
tatggtgcatgggagcagtaccttgggttggagcactctgataatgctcctaagagagct
tatgcagcaaatcagaaccgtcacacatatgagaagccggttaaaatatacaactaa

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