KEGG   Malus domestica (apple): 103453842
Entry
103453842         CDS       T03194                                 
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
mdm  Malus domestica (apple)
Pathway
mdm00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    103453842
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mdm01007]
    103453842
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103453842
Enzymes [BR:mdm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     103453842
Amino acid related enzymes [BR:mdm01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   103453842
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    103453842
 Prokaryotic type
   Other AARSs
    103453842
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d Spexin
Other DBs
NCBI-GeneID: 103453842
NCBI-ProteinID: XP_008391650
LinkDB
Position
16:complement(join(28019329..28019336,28019459..28019510,28019609..28019752,28019834..28019902,28019997..28020140,28020563..28020722,28020811..28020907,28021008..28021290,28021412..28021537,28022052..28022114,28022192..28022310,28023178..28023263,28024277..28024379,28024470..28024632,28024742..28024810,28025349..28025424,28025622..28025698))
AA seq 612 aa
MAGTPEKTAKAVADLTLESEGAMSKNARKKELKNKQREEERRRKEEEKAKQAAAVASSQV
KKDVATEDDEMDPTQYYENRLKYLATQKVDKNPYPHKFSCSITVCECVEKYAGLSDGEHL
EDISVSLAGRIMSKRSSSSKLFFYDLHGGGPDGEKVQVMADLRKSELDESEFSKFHSSVK
RGDIVGITGFPGKTKRGELSIFPRSFIVLSHCLHMMPRQKPGPASDSANVKKTDRWVPGS
PRNPEAYILKDQETRYRQRYLDLILTNEVRQIFKTRFKVIQYIRRFLDNLDFLEVETPMM
NMIAGGAAARPFVTYHNELDMKLFMRIAPELYLKQLVVGGLDRVYEIGKQFRNEGIDLTH
NPEFTTCEFYMAYADYNDLMTLTEEMLSGMVKELTGGYKIKYHSNGLDKDPIEIDFTPPF
RRIDMVEELNKIAGLNINPENLSSAEANQYLKDACKKFDIKCSPPETTTRLLDKLVGHFL
EETCVNPAFIINHPEIMSPLAKWHRSKPGLTERFELFVNKHELANAYTELNDPVVQRQRF
ADQLKDRQSGDDEAMALDETFCRALEYGLPPTGGWGLGVDRLCMWLTDSQNIKEVLLFPA
MKPQDEPSAKAI
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggcaggcacacccgaaaaaacggcgaaagcggtcgcagatttgacattggaatcggaa
ggagctatgagcaaaaatgcacggaagaaggagttgaagaacaagcaaagggaagaagaa
aggcgccggaaagaggaggagaaggccaagcaggctgctgccgtggcaagctcgcaagtt
aagaaagatgtagcaactgaagatgacgaaatggatccaacgcaatactatgaaaacaga
ctgaagtatcttgctacccagaaggtagataaaaatccatatcctcacaaattctcttgt
tcaatcaccgtgtgcgaatgtgtagagaagtatgcaggcttaagcgatggggagcatctt
gaggatatcagtgtttcattggctgggcgaatcatgagtaaaagatcgtctagctcaaaa
cttttcttttatgacttacatggtggaggacctgatggtgagaaggtccaagtgatggct
gatttaagaaaatcagagctggatgaatctgaattttctaagttccattctagtgttaag
cgtggtgatattgttggtattactgggtttccaggaaagactaagaggggggagttgagc
attttcccaagatcatttatagtgttatcacattgtcttcatatgatgccaaggcagaaa
cctggtcctgcttctgatagtgctaatgtgaagaaaactgatcgatgggtcccaggaagt
cccaggaatcctgaagcatacattttaaaagaccaggaaactcgctatcgtcaacgttat
ttggatctaatattgactaatgaggttcgacaaatattcaagaccagatttaaggtcatt
caatatattagaaggttcctggacaatctggacttcttagaggtcgaaactcctatgatg
aatatgattgctggtggagcggctgcccgtccttttgtgacttatcacaatgaacttgac
atgaagcttttcatgcgcattgcacctgaactctatcttaaacagctagttgttggtggc
ctggatcgtgtttatgagattggaaaacaatttagaaatgagggcattgatttgactcat
aatcctgagttcactacctgtgaattctatatggcttatgcagactacaatgacttgatg
acactgactgaggaaatgttgagtgggatggtcaaggaactaactggtggatataaaatc
aagtatcattcgaatgggctcgacaaagatccaattgagattgactttactcctcctttc
agaaggatcgacatggttgaggaattaaataagattgcaggtctcaacataaatccggag
aatctctccagtgcagaagctaaccaatatcttaaggatgcgtgcaagaaatttgatatc
aaatgttcccctcctgaaacaacaactcgtttgttggacaagcttgtggggcactttttg
gaagagacgtgtgtaaatcccgcgttcatcattaaccatcctgagataatgagtccttta
gcaaagtggcatcgatcaaaacctgggctgactgaacgttttgaattgtttgtcaacaag
catgaacttgccaatgcatacacagaattgaatgatcctgtggtacaacgccaacgattt
gctgatcaactcaaggaccgacaatcaggtgatgatgaagcaatggcactggacgaaaca
ttttgcagagctcttgagtatgggttacctccaactggtggttggggtttgggcgttgac
cggctctgtatgtggttaactgattcacagaatattaaggaagttctactcttcccggct
atgaaaccacaggatgagccttctgctaaagccatttag

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