KEGG   Malus domestica (apple): 103453990
Entry
103453990         CDS       T03194                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103453990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103453990
Spliceosome [BR:mdm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103453990
 Complex B
    103453990
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 103453990
NCBI-ProteinID: XP_028948934
LinkDB
Position
14:join(1382238..1382477,1382623..1382709,1382802..1382883,1384264..1384390,1384479..1384920)
AA seq 325 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTN
PGVDPQGQALDPRKIQDNFEDFYEDLFEELSKYGQIESLNICDNLADHMVGNVYVQFREE
EHAQAALQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE
LRRRLFGRNKRRHSRSRSRSRSPQRHHRGGYQERPHGGRGFGRRGEDDRDHRFNDKSRRP
RSRSPGRRGRSRSPVGAGGRRRSPPARESSAERRAKIEQWNKEREQVDSGNKYDDNNNSN
NQDDQWNGSAENNDQYYDDPHQQQQ
NT seq 978 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatccatcttcggcacagagaaggaccgcgtcaactgccccttc
tacttcaagatcggagcttgccggcacggagaccgctgctcccgcctccacaccaagccc
agcatcagccccaccctcctcctctccaacatgtaccagcgccccgatatgctcaccaac
cccggcgtcgacccccagggccaagccctcgacccccgcaagatccaggacaacttcgag
gatttttatgaggatctgttcgaggagctgagcaagtacggacagatcgagagcttgaat
atctgtgacaatttggctgaccacatggttggtaatgtgtacgttcagttcagggaggaa
gaacatgctcaagctgcgcttcagaatctcactggcaggttctatgcagggcgtcccatc
atcgtcgacttttcccccgtgacggattttcgtgaagctacctgtaggcagtacgaagaa
aatgtatgcaatcgaggtggctactgcaacttcatgcacttgaagaaaattagcagggag
ttgaggaggcggttatttgggagaaacaagcgaaggcatagtcgcagtcgaagcagaagc
cgcagtcctcaaaggcatcatcgtggtggttatcaggagcgcccacatggaggtcgtggt
ttcggtagaagaggagaagatgacagagatcatcgtttcaatgataagagcaggaggcct
agaagccgcagtcctgggcgtagaggaagaagtagaagccctgtgggtgctgggggaagg
aggaggagtcctccagccagggaaagtagtgccgaaagaagggctaagatcgaacaatgg
aacaaggagcgggaacaggtggactctggaaataagtatgatgacaataataacagcaac
aatcaggatgatcaatggaatggttctgcagagaacaatgatcagtactacgacgaccct
catcagcagcagcagtag

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