KEGG   Malus domestica (apple): 103454208
Entry
103454208         CDS       T03194                                 
Name
(RefSeq) crossover junction endonuclease EME1B isoform X1
  KO
K10882  crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03440  Homologous recombination
mdm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103454208
   03460 Fanconi anemia pathway
    103454208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103454208
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     103454208
SSDB
Motif
Pfam: ERCC4 EME1-MUS81_C Nop53 APG6_N
Other DBs
NCBI-GeneID: 103454208
NCBI-ProteinID: XP_008392023
LinkDB
Position
15:join(37347918..37348209,37348752..37348907,37349060..37349127,37350409..37350588,37350663..37350816,37350903..37351012,37351527..37351702,37352692..37352755,37352852..37352970,37354123..37354212,37354965..37355079,37357361..37357531)
AA seq 564 aa
MSEPIVLSDEEDSSPFQLFHCKKRRTEPDLNPNPNPNPNPNPTVLVLDDDPTPQKPRPTS
TPIVVPETPMSDLAIVKCTKAPSDFQSRVSDSDHNFPGVNGLICLESDNEPESGRGKQKE
KENESITSGFGVVEDLDWRFSFVESTCPLGDDLAHMSEGNSSQPTLQDDIDQVLDYPEKE
NIMDQMGNITKPRRKTKVVTDNENTTKEATERKKLAKEERTRLMEEKKLKKLEEKLQKEA
LKAEAAEMKKIQKEKQKWEKGKFALKSIVAEIDSKVVELGSVGGNLLTRFAEKGLTYRIT
SNPIERSIVWTMTVPEHLSQLSPKETEIQYMLLVYEAEEFCNVVINESLLDHVLSVRSRY
PSYTVCCLTNRLMAYIKKREQELYKNPTIHNSWRRPPVEEVLAKLTTNFYKVHSRQCADE
AELAEHVVGLTCSLSSCQFRKKLTRLDVNANGSLIPKDCIDRTSIKKSPWLKALVAIPKV
QPRFAIAIWKKYPTMKSLLSVYMDPNISVHEKEFLLKDLTTEGLLGDDRRLGDVCSKRVY
RILMAQSGCIKTDDIEDGADFFRC
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgtcggagccaatcgtcctctccgacgaagaagattcatccccattccaactgttccac
tgtaagaaacgccgaactgaaccagacctaaatccaaacccaaacccgaacccgaaccca
aaccctacggttctcgtcctcgacgacgaccctaccccacagaagccccgccccacctcc
acacctatcgtcgtcccggagacccccatgtctgatctcgcaattgtgaaatgcacgaaa
gccccttctgacttccaatctagggtttcagactccgatcacaacttccctggtgttaat
ggattgatatgtttggaatctgataatgaacctgaaagtggtcgtggaaagcaaaaggag
aaagagaatgaatcgatcactagtggctttggtgtggtggaggacttagattggaggttt
agttttgtcgagtccacatgtcctcttggagatgatctagcacatatgtctgaggggaat
tcttcacaaccaactttgcaagatgatattgatcaggtacttgattatcctgagaaagaa
aatataatggatcagatgggcaacattacaaaaccgagaagaaaaactaaagttgttact
gataatgaaaatacaacaaaagaagcaacagaaagaaagaagctggcaaaagaggaacgg
acacgcttaatggaggaaaagaagctcaagaagctagaagagaagttgcagaaagaagct
ctgaaagctgaagcagcagagatgaaaaaaatccaaaaagaaaagcaaaagtgggaaaaa
gggaagtttgccttaaaatccattgtggctgagattgattctaaagttgtggagttgggg
tcagttggaggaaatttgcttacaaggtttgctgaaaaagggttaacatatcgtataaca
tcaaatccaattgaaagatcaattgtctggaccatgactgttccagaacatctttcacag
ctttcgcccaaagaaacagaaattcaatacatgttgcttgtgtatgaagctgaagaattt
tgtaatgttgtcatcaatgaatctcttttggatcatgttcttagtgttcgaagtcgatat
ccatcttatacagtgtgttgtcttacaaacaggttgatggcatacattaagaaaagggaa
caagaactgtacaagaacccaacaattcataatagctggagacgcccacctgttgaggag
gtgctggcaaaattgaccactaatttttataaagtacactccaggcagtgcgcagatgag
gctgaacttgctgaacatgttgttggtttaacatgcagcctgtcatcttgccaatttaga
aagaagttaacgagacttgatgtaaatgctaatggatcccttatccctaaggactgcatt
gaccgaacttcaattaaaaagagcccatggttaaaagctttggtagctatccctaaggta
caaccgcgatttgctattgctatatggaagaagtaccctaccatgaaatctcttttgagt
gtttacatggacccaaatatatcagttcatgaaaaggaatttctgctcaaggacttgaca
acagaaggtttacttggtgatgacagaagattaggtgacgtttgttccaagagagtgtac
agaatacttatggcacaaagtgggtgcatcaaaactgatgatattgaggatggtgctgat
tttttccggtgttga

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