Malus domestica (apple): 103454251
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Entry
103454251 CDS
T03194
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mdm
Malus domestica (apple)
Pathway
mdm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103454251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103454251
03036 Chromosome and associated proteins [BR:
mdm03036
]
103454251
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103454251
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103454251
PBAF complex
103454251
GBAF(ncBAF) complex
103454251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103454251
NCBI-ProteinID:
XP_008392064
UniProt:
A0A498JX49
LinkDB
All DBs
Position
10:complement(join(10640177..10640527,10640614..10640804,10641021..10641682,10641760..10641926,10642420..10643079,10643650..10644176,10644574..10645015))
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AA seq
999 aa
AA seq
DB search
MEEKRRDAAGTQPASNADSPATEPSSTRRRGGAQKRKASSLGGSTSSSTPSKRFAREKPL
LSHTPIHNGPLTRARQGPSSLASASASAAGAAAKPAAQAKRPDPVGEAVAELVKRESELE
ALEASMEAEFEAIRSRGANAHVVPSHCGWFSWTKVHSIEEQMLASFFNGKSETRTPDVYL
EIRNCIMKKFHANPGTFIELKDLLELEVGEFDARQEVLEFLDHWGLINFNPFPPTGSAVA
SANSDGVAEKDSLVDKLYHFEELQSRSSVVPKTNITTPTLPSGLFPESAIAEELVWPEGP
SVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSSDFILMEPAEAPGVSG
GNWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDYEDGLEGS
AKETADPTSTGNDFSAPKDVPETTENKTAVNESDPQTSLMETSKQGTEVNVGEDTSKPED
LNEVKDGQETSTLEDTGELKVDQETDENFALKALKEAFEVVGYPPTSEGHLSFTEVGNPA
MALAAFFARLVGPDAAIASAHNSLKSISASSPGTELAARHCFILEDPPNDSKEQAGPDSV
SAEGETQKDKVHEDKSQKADNSTSGLEDKDLSNDNSDKKLEKPSTEEKSQSAKEQDDIVS
HEEVGNDNLKKSDNLELTRDESPTTAGESTDSKVETGHQTSSEKESAEGAGKPSEPTETG
RDVDMSDAVPSTKNETQQPVTSSSVEEPLQSEEAKDVDVSNSLATEINEPQPLVTAKSQE
PPERTVVLKDVDMVCDSQTPQRDEPQQPVASNSVVEKGASEDQTKDGKIEKHDSTETKVG
QKIDKLKLAAVSAVSAAAVKAKLLAEQEEDQIRQLAAMLVEKQLHKLEAKLGFFNEMEHV
VMRVREQLDRSRQKLYHERAQIIASRLGLPGSSRGMPSSMPANRMAMNMANPSPRPPLGI
TSHRPPMSRPMGAAAPTSNQFSATTLAGSSLRPPSQDKL
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacgccgtgacgccgccggaactcagccggcgtcaaatgccgactctccg
gccaccgagccgtcttctacccggcgccgcggcggagcacaaaagcgaaaggcaagcagc
ctcggcggctcaacctcttcatccacgccgtccaaacgtttcgctcgcgagaagcctttg
ctttctcacactccgatccacaacggcccgttgacccgggcccgtcagggccctagcagc
ctcgcttcggcttcggcttcagcagctggggctgctgcgaagccggcggcgcaagccaag
cggcctgacccggtgggggaggctgtggctgagctggtgaaacgggagagcgagttggag
gctctggaggcttctatggaggctgagtttgaagccattagatctcgcggtgccaatgct
catgttgttcctagtcattgcggttggttttcatggacaaaggttcactccattgaggag
caaatgttggcgtctttctttaatgggaagtctgagactcggacgcctgatgtatacttg
gagatccgtaattgcatcatgaagaaattccatgcaaatccgggcacatttattgaatta
aaggatttgttggagcttgaagttggagaatttgatgctagacaagaagtactggaattt
ttggaccactggggtttgattaacttcaacccattcccaccaacaggttctgctgtggcc
agtgccaatagtgatggggtggcagaaaaggattctttggttgataagttgtatcacttt
gaagaattacaatcacgttcatcagttgttcccaagactaatataacaaccccaacatta
ccatctgggttgtttcctgagtctgcaattgctgaagagttggtgtggcctgagggacca
tctgttgagtaccattgcaactcttgttcagctgattgctcacgtaagcgataccattgc
cagaagcaggcagattttgatctatgcactgattgctttaataatgggaaattcgactct
ggcatgtcttcatcagatttcattcttatggagcctgctgaagctcctggggttagtggt
gggaactggacagatcaggagactcttcttctccttgaagcattagaactttataaagaa
aactggaatgagattgctgaacatgttgcaacaaaaacaaaagctcaatgtatactgcac
tttgttcaaatgccaattgaggacacttttcttgattatgaggatggtttggagggtagt
gccaaagagactgcagatccaacttcaactggaaatgatttttcggcccccaaagatgtc
cctgaaacaacagagaataagactgctgttaatgagagtgacccccaaacttccctgatg
gaaacttcaaaacaagggacagaagtaaatgttggagaggatacttcaaagccagaagat
ttgaatgaagttaaagacggtcaggaaacttcaacattggaagataccggtgaattgaaa
gttgatcaggaaacagatgagaactttgcactgaaggcgcttaaagaagcatttgaagtt
gttggttatcctccaacatctgaaggccacctttcatttacagaagttggcaaccctgcc
atggcattggcagcattctttgcacgtttggtgggacctgatgctgctattgcttcagca
cataattctttgaaatctatatctgccagttctcctggaactgagctggctgcaaggcat
tgctttattttggaagatccaccgaatgacagtaaggaacaggctggtcctgatagtgtt
tctgctgaaggggagacgcaaaaagacaaagttcatgaagacaaaagccagaaagcggat
aactccacctcaggtttggaagataaagatttatcaaatgataacagtgacaagaaactt
gaaaaaccttctactgaagaaaagtcgcagtctgcaaaagaacaagatgacatagtttct
catgaggaagtaggaaatgataatttgaagaaatcggacaatttagagttaacaagggat
gaatcgccaactactgcgggggagtcaactgactcaaaagtggagacagggcatcaaaca
agttctgagaaggaatcagcagaaggagcaggaaagccttctgaacctacagagacagga
agggatgtggatatgtctgatgcagttccctctacaaaaaatgagactcaacaaccagtt
acatcaagttcagtcgaggaacctcttcaatctgaagaagcaaaagatgtagatgtatct
aattctcttgctacagaaataaatgagcctcagccactggttactgccaaatcacaagaa
ccccctgaacgtacagtggtactaaaggatgtagatatggtgtgtgattctcagacccca
caaagggacgagcctcagcaaccagttgcatcaaattcagtagttgaaaagggagcaagt
gaggatcaaactaaagatggtaaaatagaaaaacatgacagtacggagacaaaagtgggt
cagaaaattgataaattaaagcttgctgcagtttccgcggtgtcagcggctgcagtgaag
gcaaagcttctagcagaacaggaagaagatcaaatccgacaacttgcagcaatgttggtg
gagaagcagttgcataagttggaagccaaattaggtttcttcaacgagatggaacatgtt
gtaatgagggtaagagagcaattggacaggtcaagacagaagctctaccatgagcgagcc
cagataattgcatcccgccttggcttaccaggttcatctagaggcatgccatcatcaatg
cctgccaatagaatggccatgaatatggcaaacccaagtccaaggcccccgctaggcata
acttcccacaggccacctatgtcaagacccatgggggcagcagccccgacttcgaaccaa
ttttcagccacaacattggcaggaagttcactacggcctcctagccaggacaaactttag
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integrated database retrieval system
