KEGG   Malus domestica (apple): 103454361
Entry
103454361         CDS       T03194                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103454361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103454361
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103454361
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     103454361
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Peptidase_C101
Other DBs
NCBI-GeneID: 103454361
NCBI-ProteinID: XP_028946313
LinkDB
Position
12:complement(join(7689036..7689632,7689909..7690722,7691966..7692106,7692575..7692837,7692950..7693148,7694010..7694212,7695753..7695964,7696712..7696856,7696980..7697387,7697609..7697827,7697957..7698104,7698221..7698309,7698961..7699224,7699303..7699493,7702316..7702478,7703057..7703227,7703396..7703593,7706269..7706541,7706692..7706851,7707381..7707556,7707717..7707731))
AA seq 1682 aa
MASSEVPTASTEAIKFAFLTDEEVRQHSFLRVTDPSLLTQLGNPVAGGLYDKALGPIDDK
PGESCGTCGEKSRNCPGHCGHIDLALPVYNPLLFNTLFKLLQRTCFFCYHFRTDQTHVEK
AVSQLKLIMEGDVVGAKMLDSDSPSEYLDNEGDSHSDKHAKQQGWTSLQFTELMSVFDKA
LPKQGKDCNNCKAKNPKIIKPTFGWFQMSGAENARENVIRGCNLVGPLTGQDEGDENENV
DNNDMEKHNGEGSKVPSEFLNQTTSLSGDLLPKQVQDIIKLLWENEAEFCSFIGDIQCHG
IGRKAGHSMFFLETVLVPPIKFRPPSKGGDSVMEHPQTVLLSKVVQANNSLQESVVTKSD
PSKTIRQWRDLQEYINVMYNSKTATGKGQKDADPGICQLLEKKEGLFRQKMMGKRVNYAC
RSVISPDPYLAVNEIGIPPYFATRLTYPERVTPWNVDKLRNAIVNGPEIHPGATQYVDKS
SVKMLRQNRRERISTARKLPSSKGLATQHGKGSDNSYENKVVFRHLRDGDIVLVNRQPTL
HKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANN
QYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWEEFNQLLYSSCVSARRSDALSGKPDQ
KVFMCNIEGTMQPLLPAIWKPERLWTGKQVITALLNHITRGSPPVTVEKDAKIPRGFFNC
NLEEEKFDEEELQKKKKRSKGKQADECGSQEKKPDKKVDNDKSKDTGVVDENSLLIYKNN
LVRGVIDKAQFGDYGLVHTVQELYGSDAAGILLSVLSRLFTVYLQMHGFTCGVDDLLVMP
SKDTKMKEQLESCEEIGEKVFRDFIEVEDDKRKDLVALQLNIEKFIRSNGESALAALDRR
MISQLNNKTSNSDVFKQLLLKGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQELE
GKRVPQMVSGKTLPCFHPWDWSSRSGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKT
SRSGYLQRCLIKNLECLKVCYDHTVRDADGSIVQFYYGEDGVDVHLTSFLQKFDSLAANK
EMFQNKFHRQIDKSDPYISELPSALKYKAEKFVHDLSLKEESYNLFSQVDFLKLMEHKYL
SSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANEIKT
PVMTCPLRKRRSKEEAQHLANKLKKITVADIIESMEVTLLPFVLQGLETCRIYKLQMKLH
IPEHLQNIIQDISEDWEEILEVMFVRALEDAIQSHVLLLSKISGIKNVTDAPQKASNEMD
ENISKSGHQHQEEDDDNDGADDGEGAEDFGMDAQKRKLQAFDEMDYEDGCEDEVRDGDLT
DGDEVENDADNDEENDVETGKDGAIEVVDATDEMPANPLEEAGDLLKTKSKEKKNKSGAT
IKKKKIRAQLVRKDTDRSIFVSAKGFHFEVHFKFTDEPHILLAQIAQQTAQKVCMQRSGS
VDDCKQITCDENQVLLYGKDPENKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYL
YSNNIHAMLNTYGVEAARETIIREIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRF
GGIAESISPFNKMSFETASKFIVEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKI
EV
NT seq 5049 nt   +upstreamnt  +downstreamnt
atggcttcctcagaggttccgacggcgtccactgaggcgattaagtttgctttcttaact
gacgaggaggtgcgacagcacagctttctgagggttaccgacccatctctccttactcaa
ttaggaaaccccgtggccggtgggctatatgataaggcactcggcccaattgatgacaaa
cctggcgaaagttgcggaacatgtggtgagaagtcgcgtaattgcccgggtcattgtggt
catattgaccttgcgttgccagtttataatcccttgctgttcaatactcttttcaaactt
ctacaaagaacgtgtttcttctgctaccattttcggacagaccaaacacatgttgagaaa
gctgtttcccaattaaaactcataatggaaggtgacgtcgttggggctaaaatgttggat
tctgactcacctagtgaatacttagacaacgagggagatagtcacagtgacaagcatgca
aagcagcaaggatggacttctcttcagtttacggagctaatgtctgtttttgataaggct
ttgccgaaacaagggaaggactgcaacaattgcaaggcgaagaatcccaaaatcatcaaa
cctacttttggatggtttcaaatgagtggcgctgaaaatgcgagagaaaatgttatcaga
gggtgcaacctggtgggacccctaactggtcaagatgaaggggatgagaatgaaaatgtt
gacaataatgatatggaaaagcacaatggagaaggaagcaaagtgccaagtgagttcctt
aatcagacaacttccttgtcgggagatctattaccaaaacaggttcaagacatcataaag
cttttgtgggaaaatgaagctgagttctgctcttttattggtgatatccaatgccatgga
attggaagaaaagcaggtcactctatgtttttcttagagactgtacttgtgccaccaatc
aaatttcgtcctccttccaagggtggtgattctgtgatggagcatcctcaaaccgtttta
ttaagtaaggtggtgcaggcaaataattctttgcaagagtctgttgttaccaagtccgac
ccctcaaagacaattcggcagtggagggatcttcaagagtacataaatgtgatgtacaat
agcaaaactgctactggtaaaggtcaaaaagatgcagatcctggaatatgtcagttgctt
gagaagaaggaaggcctgttccggcagaaaatgatgggcaaacgggttaattatgcgtgt
cggtctgtcatatccccagatccctatttagctgttaatgagattggaattcctccgtat
tttgcaacgagattaacatatcctgagagagttactccgtggaatgttgacaagttgagg
aatgcaattgtcaacggtcctgaaatccatcctggagctacacagtatgtggataagtcc
tctgtgaagatgttgagacaaaaccggagagaacgcatttcaacagcaagaaaattacct
tcttcaaaagggcttgctacacaacacggaaaaggatctgataatagctatgaaaacaaa
gttgtttttcgtcacttgcgagatggggacattgtgcttgtcaatcgacagcctacactt
cacaaacccagtataatggcgcatgtagttcgtgtattgaagggggagaaaacaattcgc
atgcactatgcaaattgcagtacgtacaatgctgattttgatggtgatgaaatgaatgtt
cattttccacaagatgaaatttctcgagcagaagcttacaatatcgtaaatgcaaataac
cagtatgtaaagcctaccagcggtgatccaattagagccttgattcaggaccatgtcata
agtgctgtcctccttacaaagaaggatacctttttgcgctgggaggaatttaatcagctt
ctttatagttcatgtgtttcagcccgtcggtcagatgctttgtctggaaaaccagatcaa
aaggttttcatgtgtaacattgaaggcacaatgcagccccttcttcctgctatttggaaa
ccagagcgtctttggactggaaaacaggtcatcactgccttgctaaatcatattactagg
ggttctccgccagttactgtagaaaaggatgcaaaaatcccacgtggtttttttaactgt
aatcttgaagaagagaaatttgatgaagaggaactacagaaaaagaagaaacgaagcaaa
ggaaaacaagctgatgaatgtggatcacaggagaagaaaccagacaaaaaagtagataac
gataaatcaaaggacacgggggttgtagatgagaacagtttattaatctataaaaacaat
ttggtgcgcggtgtgattgacaaggctcagtttggtgattatggtttggtccatacagtg
caggagctctatggctcagatgctgcaggaatattgctttctgtattgagtcgtttattt
actgtttatttgcagatgcatgggttcacatgtggtgttgatgatcttctggtgatgccc
agcaaagacacaaaaatgaaggaacaacttgaaagttgtgaagagattggtgaaaaagtt
ttccgtgattttattgaggtcgaagatgataaaagaaaagatctagtggcactgcaattg
aacattgaaaaatttatacggagtaatggagaatctgccttggcagccttggataggaga
atgattagtcagcttaataacaagacctccaactctgacgtcttcaaacaattattgttg
aaagggttatcaaaaccgtccgttaagaattgtatctatcttatgaccacatctggggct
aaaggtagtgtggccaacctccaacaaataacttcgtatttgggtcagcaagagctagaa
ggcaaacgggtgcctcaaatggtttctggaaagaccttaccgtgctttcacccatgggat
tggtcatctcgatctggaggctttattattgatcgttttcttaccggtcttcggcctcag
gagtattattttcattgtatggctggtcgtgaagggttggttgatacagctgtcaaaaca
tctcgtagtgggtacctgcaaaggtgcctaataaaaaatcttgagtgcctaaaagtttgt
tatgaccatactgtccgtgatgctgacggttccattgttcaattttattatggagaagat
ggtgttgatgtccatttgacaagcttcctacaaaaatttgactccctggcagctaataaa
gaaatgttccagaacaaattccatcgacaaatcgacaaatctgatccttacatttctgag
ctgccttcagctctcaagtataaagcagagaagttcgtgcatgatttgtccttgaaggag
gaaagttataacttattcagccaagtggatttcttgaagttaatggagcataaatacctc
tctagtcttgctcaacctggagaaccagttggtgttcttgctgctcagtcagtaggagaa
ccttcaactcagatgacactgaatactttccatcttgctggaagaggtgaaatgaatgtg
acacttggaatccctcgtcttcaagagatcttgatgacagctgcaaatgagattaagact
ccggttatgacatgtccattgcgaaaaaggagatcaaaggaggaagctcagcatctagct
aataagttgaagaagatcactgtggcagacataatagagagtatggaagttacgttgttg
ccatttgtccttcagggtcttgaaacttgccgtatttataaacttcaaatgaaactccac
atacctgaacatcttcaaaacatcattcaagatatatcagaagattgggaggaaatccta
gaggttatgtttgttagggcgttggaagatgccatacaaagtcatgtgctcttgctttcc
aaaattagtggtataaaaaatgtcactgatgcaccacaaaaggcatcaaatgagatggat
gaaaatatttctaaaagcggacatcaacatcaggaagaagacgatgacaatgatggtgca
gacgatggtgaaggggccgaggattttggtatggatgcacaaaagcgaaagctgcaagct
tttgatgagatggattatgaagatggatgtgaagatgaagtgagagatggagatctgaca
gatggagatgaagtcgaaaatgatgcagataatgatgaggagaatgatgttgaaactggt
aaggatggtgcaattgaggttgtagatgctactgatgaaatgcctgcaaatcctttagaa
gaggctggagacctacttaagaccaagtcaaaggagaaaaagaacaaatcaggagccaca
attaaaaagaaaaagatcagagctcagttagtaagaaaagataccgacaggtcaatattt
gtgtcagcgaaggggttccactttgaggtccattttaaatttaccgatgaacctcatatt
ttgctggctcagattgctcagcagacagcccagaaggtttgtatgcaaagatctggcagt
gttgatgactgtaaacaaataacttgtgacgaaaatcaagtcctcttatacggaaaggat
cctgagaataaacaaagttattcatccaaggaaaaaaaggagatggcagctctgcagacc
actggagtggatttccgtacattttggaaattgcaagatgttcttgatgtcaggtattta
tattccaacaacatacatgccatgctgaacacttacggagttgaagccgccagggaaact
atcatcagagaaattatgaacgttttcaagtcttacgggatatcagtcaacattaggcac
cttacgcttatagctgactacatgactcactcgggtggttatcgaccgatgaatagattt
ggaggcatagcagagtcgatatctccgtttaataaaatgtcttttgagacagcttctaag
ttcattgtcgaagcagcatatcacgggcagacggatgacttggaaacgccatcctcgagg
atctgtcttggattgccagtcaaggtaggcactggatgttttgatttgatgcagaagata
gaggtttag

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