KEGG   Malus domestica (apple): 103454362
Entry
103454362         CDS       T03194                                 
Name
(RefSeq) target of rapamycin complex subunit LST8 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
mdm  Malus domestica (apple)
Pathway
mdm04136  Autophagy - other
mdm04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    103454362
   04136 Autophagy - other
    103454362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103454362
Membrane trafficking [BR:mdm04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    103454362
   mTORC2 complex
    103454362
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_IFT140_1st ASA1 ANAPC4_WD40 Beta-prop_Nup120_160 CFAP251_N NBCH_WD40 Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_IFT140_2nd Beta-prop_NWD2_C Beta-prop_WDR19_1st PAC11 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd CFAP43_N DmsR_N
Other DBs
NCBI-GeneID: 103454362
NCBI-ProteinID: XP_008392179
LinkDB
Position
12:join(7684714..7684725,7685008..7685130,7685454..7685555,7685690..7685802,7685944..7686013,7686201..7686278,7686761..7686877,7686966..7687063,7687306..7687385,7687509..7687568,7687911..7688038)
AA seq 326 aa
MSTQEEVKMSQQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRFLA
AAGNPHIRLFDVNTNSPQPVMSYESHSNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPG
CQREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVM
WDGSLVVAANNHGTCYVWRLLRGTQTMTEFAPLHKLQAHKGYYILKCLLSPEFCEPHRYL
ATASSDHTVKIWNVDGFTLEKTLVGHSRWVWDCVFSVDGAYLITASSDTTARLWSMSTGE
DIRVYQGHHKATICCALHDGAEPSAS
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcaactcaggaggaggttaagatgagccagcaaccatcggtgatccttgcaacggct
agctatgatcacactattcggttttgggaggccaaaagtggccgctgctaccgtaccatc
cagtaccctgattcgcaagttaataggcttgagattactccagataaacgcttcctggct
gccgctggaaatcctcacattcgattatttgatgttaatacaaatagccctcaaccggtg
atgagctatgagtcacatagtaataatgtaatggcggtagggtttcaatgtgatgggaac
tggatgtattcaggttctgaggatggtacagtaaaaatttgggatttgagagccccaggt
tgtcaaagggaatatgaaagtcgtgcagctgttaacactgttgtgcttcacccgaatcag
actgaactaatatctggggaccaaaatggcaatattcgtgtttgggacttgacagcaaat
tcatgcagctgtgaattggttccagaggtggatacagctgtaaggtcattaacagttatg
tgggatgggagcttggttgttgcagcaaataatcatgggacatgctacgtttggcgcttg
ttgcggggaacccagacaatgacagagtttgcaccacttcataaactgcaagcacacaag
ggatattacattcttaaatgtctgctttcacctgaattctgcgaaccccacagatacttg
gcgactgcctcttcggaccacactgtcaagatatggaatgtagatggtttcacattagag
aaaactttagtaggtcattcacgatgggtttgggactgtgttttctcggtagatggtgcc
tatcttataacagcttcctctgatacaacagcaaggctttggtccatgtccaccggcgaa
gatatcagggtgtatcaagggcatcacaaagcaaccatttgttgtgcactccatgatgga
gccgaaccttctgcatcttga

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