KEGG   Malus domestica (apple): 103454633
Entry
103454633         CDS       T03194                                 
Name
(RefSeq) protein SPA1-RELATED 2
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
mdm  Malus domestica (apple)
Pathway
mdm04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    103454633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103454633
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    103454633
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Pkinase Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_DCAF12 WD40_like WD40_MABP1-WDR62_1st eIF2A PK_Tyr_Ser-Thr WDR90_beta-prop_4th WD40_RFWD3
Other DBs
NCBI-GeneID: 103454633
NCBI-ProteinID: XP_028960570
LinkDB
Position
06:complement(join(22658689..22658880,22659086..22659145,22659315..22659632,22660477..22660623,22660911..22661748,22662633..22662790,22662882..22664306))
AA seq 1045 aa
MEDAVAEEVNPLDPAEVAQLQGKENDYSLKSETGNPLECQEMRIPVDGDYPLSSQHEILE
KVDMASYVNKLEHPYSGLGFMNDVGFMEEELTLRNYNSSNLAMLDTSNNQGRMQSRQNPQ
QHLFQLASGSGSGSSQVKTAVKDNGKAISGGLENEGATSFPGFWNKRELSDNHYDVVEEL
TNIENTGASANTYAGIRTKILSRPGFSEFFVKSTLKGKGVILKGPNHENGHIESRNLNSL
KVAGDSLAASNPTMSMNANVVTPSSNGVNVGLRGGGSNHDENSLREWLNIGRPKANKVEC
LYIFRQIVDLVDNFHSKGVSLPGLRPSFFKLLPSNQVKYVCLPVRNEMLESTRDRDTSLL
ENSSIKKKQKISQNTRLHWPQFSSTAYFMHDNVNTSHINIARLQNRSDAFDEHNPRTRHE
IRTISTNPHMDYAAQRFTPISELLEEKWYISPEELSEGSCTIFSNIYSLGVLLFELLAHF
DSNSALAAAMSNLRHRILPPNFLSENGKEVGFIMWLLHPEPSSRPTTRQILQSEVVNRLQ
EVSVKELSSSVEQEGAELDLLLHFLTSLKEQKQNHAANLLETIGFIEADVEEVERRHSLR
KPLIDRGLYDESISGSKYMFVSKEDSRSEVLSPLFPVPSSNESRLMKNIDQFESAYFSMR
SRIQIPETDSRVCRDKDLLRTRNNWYVGTKDEDKETCTDRLGAIFDGLCKYSRYSKFEVR
GILRNGDFSSSSKVISSMSFDRDEDYFATAGVSMKIKIFEFNAFFNNSVDIHYPVIEMSN
KSRITCVCWNNYIKNYLASSDYDGVIKLWDASTGQEFAQYTEHVTRAWSVDFSQVYPTKL
ASGSDDGSVKLWSINEKNCLDTIKHAANVCCVQFSAHSSHLLAFGSADYHTYCYDLRNTK
IPWCVLDGHKKAVSFVKFLDSETLVSASTDSTLKLWDLNRTSTSDPSTDACSLTLGGHTN
EKNFVGLSVSDGYIACGSETNEVYAYYRSLPMPITSHKFGSIDPISGKETDDYSAQWVSS
VCWRGKSDMVVAANSDGCIKVLEIV
NT seq 3138 nt   +upstreamnt  +downstreamnt
atggaggatgcagtggctgaggaagtgaacccattagatccagcagaggttgcacaactc
caagggaaagagaatgactactcactaaaatctgaaaccggcaacccattggaatgccaa
gagatgcgtataccagttgacggtgattatcccttaagctcgcaacatgagattttagag
aaagtagatatggctagctatgttaacaaattagaacacccatatagtggcctaggcttt
atgaatgatgttggtttcatggaggaagagctaactctgaggaattacaatagttcaaac
ctagccatgcttgatacatcaaacaatcaaggaagaatgcaatctaggcagaacccgcaa
caacatttatttcagctagcaagtggatcaggaagtgggagttcacaagtcaaaactgca
gtcaaggataatgggaaggcaatttccggtggcttggagaatgagggggccacatctttc
cctggtttttggaataaaagggaattaagtgacaatcactatgacgttgtggaagaattg
acaaacattgaaaatacgggggcttcagccaacacttatgcaggtattcggacaaaaatc
ctatctaggccaggattttctgagttttttgttaaaagtacactgaagggtaagggtgtc
atattgaagggtccgaatcatgagaatggtcacattgaatctagaaacctgaatagtttg
aaggtggccggtgattctttggcagcttctaatccaacaatgagtatgaatgcaaatgtc
gttacgccttcttccaatggtgtgaatgtcgggcttaggggtggtggctctaatcatgat
gaaaacagtttgagagaatggctgaatattggacgtcctaaagcgaataaagttgaatgc
ttgtatatatttagacaaatagtggatctggtggataattttcattctaaaggagtttct
ttgcctggattgcgaccttctttcttcaagttgttaccttcaaatcaggttaagtatgtt
tgcttaccagtccggaacgagatgcttgagagtacgagggatagagatacatccctttta
gaaaatagttcaatcaagaaaaagcaaaagataagtcagaacactagattgcactggccc
cagttctctagcactgcctacttcatgcatgataatgtgaataccagccacatcaacatc
gctcgtttgcagaacagaagtgatgcatttgatgaacataatccaagaacaaggcatgag
atacgtaccatatccaccaatcctcatatggattatgcagctcagcggtttactccaata
agcgagctattggaagagaagtggtatattagtcctgaggaactcagtgaaggaagttgc
acaattttttcaaatatctacagtctgggtgttcttctttttgagttacttgctcatttt
gactcaaatagtgcccttgctgccgcaatgtccaatctgcgccacagaattcttccccca
aatttcctgtcagaaaatggtaaggaggttggatttattatgtggcttcttcatcctgaa
ccatcttcacgcccaacaacaaggcaaattctacaatctgaagtagttaacaggttacag
gaggtttctgtaaaagaattgtcatcttctgtggaacaagagggtgcagaattggattta
ttattgcatttccttacttctttgaaagaacagaagcagaaccatgccgcaaatttgttg
gaaaccattgggttcatagaagcagatgttgaagaagtggagaggaggcactctctaaga
aaacccttgattgatcgtggcttgtacgatgaatccatcagtggaagtaaatatatgttc
gtgagcaaagaagattcaaggtcagaggtgctttctccattatttcctgttcctagttca
aatgagtcgaggttgatgaaaaacatagatcagtttgagagtgcttacttctcgatgaga
tcaagaattcagattcctgagactgattctagagtatgcagagataaagatttattaaga
actcgcaataattggtatgtgggaacaaaggatgaagacaaggagacatgcactgatcga
ctgggagccatctttgatggtttgtgtaaatattcgcggtatagtaagtttgaggtacgt
ggcatactaagaaatggagatttcagcagttcctctaaagtaatttcttctatgagtttt
gatcgggatgaagactattttgctactgctggggtttcaatgaaaattaagatttttgag
tttaatgctttcttcaacaattctgttgatattcattatccggtgattgagatgtcaaac
aaatcaaggatcacatgtgtttgctggaacaactacataaaaaactatctggcttcatct
gattatgatggtgtaatcaagttatgggatgccagcactggtcaagagtttgctcaatac
actgagcatgtaacgagggcttggtctgtagacttttctcaagtatatccaacaaaatta
gccagtggaagtgatgatggttctgtaaaattgtggagcatcaacgagaaaaactgttta
gataccatcaagcacgctgcaaatgtatgctgtgtacagttctctgctcactcctctcat
ttgctggcctttgggagtgcggactaccacacctactgctatgatcttcgtaatactaaa
attccatggtgcgtactggatgggcataagaaagctgtaagctttgtgaaatttttggac
tcggagacccttgtttctgcatccactgacagtacattaaagctatgggatcttaacaga
accagtacgagtgatccgtccaccgatgcttgcagcctaacccttggtgggcatactaat
gagaagaactttgtcgggttatccgtttcagatggttacatagcatgtggttcagaaacg
aatgaggtttatgcttactatagatctctgcctatgccgatcacttcacacaagtttggc
tccattgatcctatttctggaaaggagactgatgattatagtgcacaatgggtttcgagt
gtctgctggagagggaaatcagacatggttgtcgctgccaattcagacgggtgtataaaa
gtgttggagattgtttaa

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