Malus domestica (apple): 103454878
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Entry
103454878 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103454878
03036 Chromosome and associated proteins [BR:
mdm03036
]
103454878
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103454878
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103454878
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
103454878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
PHD
Prok-RING_4
GerD
Ribosomal_S18
Motif
Other DBs
NCBI-GeneID:
103454878
NCBI-ProteinID:
XP_008392691
LinkDB
All DBs
Position
14:join(23285486..23285926,23287093..23287625,23287741..23287866,23288087..23288189,23288281..23288342,23288417..23288519,23288797..23288941,23289247..23289461,23289714..23290553)
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AA seq
855 aa
AA seq
DB search
MAQVSQLPCDGDGVCMLCKATPPDAEKLTCKTCVTPWHAACLLAKPESLAATLQWECPDC
TSISGDAPAHVPAVNAGVDGGLVAAIREIENDATLTEQEKARRRQELMSGKATVEEEKKE
AKNDVLDVLGGIFNCVFCMQLPDRPVTTPCGHNFCLKCFQKWVGQGKRICGKCRGQIPPK
MASNPRINSSLVSCIRTAKLSKANANGGPARVYHYVQNQDRPDKAFTTERAQKTGKANAS
SGKIFVTIPGDHFGPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSDHG
AQSVVLSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTNKKQSFDQTFDKYNKALRLSCLKG
YPVRVVRSHKEKRSSYAPADKGVRYDGCYRIEKCWLKVGVQGFKVCRYLFVRCDNEPAPW
TSDEHGDRPRPLPDIPELKAAKDITVRKGSPSWDFDEKDGRWTWMKQPPPSKKPILAFCP
EAQRKTTKAIKKAQKMTVRQKLLKEFSCQICREVMTAPVTTPCVHHFCKSCLEGAFVGKS
FVTERSRGGRSLRAQKNVMKCPACQMDISDFLKNPQVNTEIKDMIESLKAQNEKEEKVDP
TEESSDEEDEDPNEVLSENDSDNETADPVSDEAGVNGNGQTSRTKLPTRSPKRLKVDAGN
SSSKTDNDGESKEIFGAQTDGSKGDPKESKSDAPVAKRGRKPAAQGGAGAKARGRKRTKE
EEEAPGDAEGKSSPSSPLQVQSDEDPKESEKPAAKFGRKPASQDGTGAKTRGRKKAQEKE
AWGNEEGNGSQSSPQQVQSVEDPKENKKRAAKHGRKAAGEGGAGAKKAREEEAMDVDDGN
VSPSSPLHVKADDLE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagttagccagcttccctgcgacggagacggcgtctgcatgctctgcaaggcg
actccgcccgacgccgagaagctcacctgcaagacctgcgtgactccctggcacgctgcc
tgcctcttggccaagcccgagtccctggccgccactctccagtgggagtgccccgactgc
acatcaatctccggcgatgctccggcgcacgtccccgccgtgaacgccggcgtggacggc
ggtttggtggcggcgatccgggagatcgagaacgacgcgaccctgacggagcaggagaag
gcgaggaggaggcaggagctgatgagcgggaaggcgacggtggaggaggagaagaaggag
gcgaagaacgacgtcttggatgtgcttggtgggattttcaactgcgtcttctgtatgcag
ttaccggataggcctgttacgacaccatgtggacacaatttctgcctgaagtgcttccag
aaatgggttggacaagggaagcgtatttgtggaaaatgccgtggtcaaattcctcccaag
atggcaagtaacccccgaatcaactcttcacttgtatcttgcatacgtacggctaagttg
tcaaaagcaaatgcaaacggggggcctgctcgggtttatcattatgtacaaaatcaagac
aggccggacaaggcgttcacaacagaacgtgcacagaagactggaaaagctaatgcttca
agtggcaagatatttgtcacgattccaggagatcactttggacccattcctgctgaaaat
gatccagagagaaatcaaggtgttctggttggtgagtgctgggaagataggcttgaatgt
agacaatggggtgcacattttccccatgttgctggtatagctgggcagtctgatcatggt
gcacagtcagttgtgctttcaggaggctaccttgatgatgaggatcatggagagtggttc
ttatataccggaagtggtggaagggatttgagtggtaataagcgaacaaacaagaaacag
tcttttgaccagacatttgacaaatataacaaggctctccgactcagttgcctgaaaggt
tatcctgtgcgggtggtaaggtctcacaaggagaagcgttcctcatatgcccctgctgat
aaaggtgttcggtatgatgggtgctacagaatagaaaaatgttggcttaaggttggagtc
caggggttcaaagtctgccggtatctttttgtcagatgtgataatgaacctgcgccatgg
acgagtgatgagcatggggatcgacctagacctttacctgatattcctgagctgaaggca
gcaaaagatataacagtgaggaaaggaagtccatcttgggactttgatgaaaaagatggc
cgctggacatggatgaagcaaccacctcccagcaaaaaacctattctagcattctgtcct
gaagctcaaaggaagacaacaaaagcaatcaagaaagcacaaaaaatgactgtacgacag
aagctcttgaaagaattcagctgccaaatttgtcgggaggtgatgactgcaccagtaacc
acaccttgtgttcatcacttttgcaagtcgtgcttagaaggtgcttttgttggcaagagt
tttgtgacagaaagaagcagaggtggacggtctctccgagcccaaaagaatgtgatgaaa
tgccctgcctgccagatggatatctctgattttctgaagaatcctcaggtgaatacagag
ataaaggatatgatcgagtcactaaaagctcagaatgaaaaggaagagaaggtggatcca
actgaggagtcaagtgatgaagaggatgaggatccaaacgaggtgttaagtgaaaatgat
tctgacaatgaaactgctgatcctgtgtctgacgaagcaggagtgaatggcaacgggcag
acttcacgaacaaagttgcccacaaggagtcccaaacgtctgaaggttgatgctggtaat
tcctcatcaaagactgataatgatggggagtcaaaggaaatttttggtgcccagactgat
ggttcgaagggagatcctaaagagagcaaatctgatgctcctgttgcaaagcgtgggagg
aaacctgctgctcagggtggtgctggagcgaaggcccgaggaagaaagaggactaaggag
gaggaggaagcaccgggtgatgcagaaggaaaatcttcaccatcaagtcctctgcaggtg
caatctgatgaggatccaaaagagagcgagaagccagctgcaaaatttgggaggaagcct
gccagtcaggatggtactggagcaaagactagaggaagaaaaaaggctcaggagaaagaa
gcatggggaaatgaagaaggaaatggctcacagtcaagtcctcagcaggtgcaatctgtt
gaggatccaaaagagaacaaaaaacgagctgcaaagcatggcaggaaggctgctggcgag
ggtggtgctggagcaaagaaggctcgggaggaagaagcaatggatgttgatgatggaaat
gtttcaccatcaagccctctgcacgtgaaagccgatgatttggagtga
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