Malus domestica (apple): 103455055
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Entry
103455055 CDS
T03194
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
mdm
Malus domestica (apple)
Pathway
mdm04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103455055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103455055
03029 Mitochondrial biogenesis [BR:
mdm03029
]
103455055
Membrane trafficking [BR:
mdm04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103455055
Others
Specific organelles associated proteins
Auto phagosome
103455055
Mitochondrial biogenesis [BR:
mdm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103455055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_VPS8
ANAPC4_WD40
ATG16
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_HPS5
Beta-prop_NWD2_C
ASA1
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
eIF2A
Beta-prop_NUP159_NUP214
SHKBP1_KCTD3_C
WD40_RFWD3
WDR54
Cytochrom_D1
B-prop_COPA_B_2nd
PQQ_2
Small_EgtBD
PEP5_VPS11_N
Helical_CED_Drosha
Ge1_WD40
Beta-prop_RIG_1st
LEKR1
DUF8228
DUF4854
Motif
Other DBs
NCBI-GeneID:
103455055
NCBI-ProteinID:
XP_008392873
LinkDB
All DBs
Position
14:join(25232764..25232765,25232876..25233002,25233307..25233488,25233580..25233775,25234327..25235349)
Genome browser
AA seq
509 aa
AA seq
DB search
MSQEEIAREAIKHALKALRRRHLAEEGAHAPAFIALSKPILHQGSEWKEKAENLEMELQQ
CYKAQSRLSEQLVVEVAESRTSKASLQEKEAAVANLQKELSEQRDECSQLAADLEEKVKA
LELVVSENKEIRAQLEEMSIRAKNAEAENKVLIDRWMLEKMKDAERLNEANALYEDMIER
LRASGLEKLARQQVDGVVRQSEEGAEYFLESTIPSTCKNRMPAHDGGCASILFEYNSGKL
ITGGQDGSIKMWDTNTGSLTRTLYGCIGSVLDLTITHDNRSIIAASSSNKLYAWDVNSGR
VRHTLTGHMDKVCAVDVSKFSSRHVVSAAYDRTIKVWDMQKGYCTNTIMFPKNCNALSFS
MDGQTICSGHVDGNLRLWDIEKGKLLSEVAAHSNAVTSISLSRNGNVILTSGRDNVHNLF
DMRSLEVCGTLRATGNRVASNWSRSCISPDDNYVAAGSADGCVYIWSISKADIVSTMKEH
TASVLCCSWSGHGKPLASADKNGIICTWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggaggagattgcgagggaagcaataaaacacgctctgaaggctcttcggcgg
cggcatttggcggaagaaggtgctcatgctccagctttcatcgctctttcgaagccaatt
cttcatcagggctcagaatggaaggagaaagcggagaatctggaaatggaacttcagcag
tgttacaaagcccaatctcggctgtccgagcaactcgtggtggaagtagcggagtccaga
acttcaaaagcttcacttcaagagaaagaggcagcagtggctaatcttcagaaggaatta
tctgaacaaagggatgaatgctctcaattagcggctgacttggaagagaaggttaaagct
ttggaattggttgtgagtgagaacaaggaaataagagcgcagctagaagaaatgtctatt
cgagctaagaacgctgaggccgaaaataaggtgttaattgaccgctggatgttggagaag
atgaaggatgcagaacgccttaacgaggcaaatgcactctatgaagatatgattgagcgg
ctgagggccagcggtttggagaaacttgctaggcagcaagtagatggtgttgtccgccaa
agtgaagaaggtgctgagtactttttggagtcaaccattccctccacatgcaagaatagg
atgcctgcccatgatggtggctgcgcttccatattatttgagtacaattcagggaaattg
attactggtggacaggatgggtccatcaaaatgtgggatacaaatactgggtcactaact
cgtacactctatggttgcattggttctgttctggatctcacgattactcatgataataga
tctatcattgcagcaagcagctctaacaaattgtatgcctgggatgttaactcggggagg
gttcgacatactctcactggccacatggataaagtgtgtgcagtagatgtcagcaaattc
tcaagccgccatgttgtgagtgcagcttatgatcgtaccataaaagtttgggatatgcag
aaaggttactgcaccaacacaatcatgttcccaaaaaactgcaatgctctgtcatttagc
atggatggacagaccatatgttctggccatgttgatggaaatcttcgtttgtgggatatt
gagaaaggaaaactcctcagtgaagtagctgcacactcaaatgctgttacatccatatct
ttgtcccgaaatggcaatgttatactgaccagtgggagagacaatgtccataatttgttt
gacatgcggtctctagaagtctgtggaacattaagagccacaggaaacagagtagcgtcg
aattggagtagatcctgtatcagtccagatgacaattacgttgctgctggatctgctgac
ggttgtgtgtatatttggtcaatatcgaaagctgacattgtgagcactatgaaggagcac
actgcatcggtcctgtgttgttcatggagcgggcatggaaaacctctggcttctgcggac
aagaacggaatcatctgtacttggacgtga
DBGET
integrated database retrieval system
