KEGG   Malus domestica (apple): 103455075
Entry
103455075         CDS       T03194                                 
Name
(RefSeq) pachytene checkpoint protein 2 homolog
  KO
K22399  pachytene checkpoint protein 2
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103455075
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Others
     103455075
SSDB
Motif
Pfam: AAA_lid_TRIP13_C TRIP13_N AAA AAA_16 AAA_22 nSTAND3 AAA_18 AAA_14 NACHT AAA_28 NPHP3_N AAA_7 AAA_5 Viral_helicase1 DUF815 AAA_30 RNA_helicase TIP49 Cytidylate_kin TsaE RuvB_N AAA_24 AAA_11 ABC_tran ATPase_2 AAA_33 AAA_2 AAA_17 IstB_IS21 Rad17 bpMoxR KAP_NTPase nSTAND1 AAA_19 PduV-EutP AAA_3 NB-ARC SLFN-g3_helicase Mg_chelatase AAA_13 Cytidylate_kin2 ResIII nSTAND6 Sigma54_activat NTPase_1
Other DBs
NCBI-GeneID: 103455075
NCBI-ProteinID: XP_008392891
LinkDB
Position
14:complement(join(25713974..25714114,25714202..25714327,25714406..25714533,25714837..25714927,25715074..25715144,25715231..25715300,25715408..25715483,25715583..25715672,25715781..25715885,25715965..25716068,25716150..25716217,25716461..25716567,25716755..25716818,25716957..25717089))
AA seq 457 aa
MSAPSPMDVSMQNPQDVDVPDQNGAVAIDSAPSPILPQDKVLVSVEVSLKPSSTARADDV
RSAVERMLEKRSLSYTDGPVPVPLDDQFLTENVQRICICDTDEWVQNHDILLFWQVKPVV
HVFQLSEEGACEDVSGDGQPSTFNEWILPANEFDGLWESLIYESGLKQRLVRYAASALLF
TEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFS
KWFSESGKLVANLFSKIQEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNA
LLTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLHELI
RTGILSHLEDCDSMLPNFASLREKLNMPEVQDAQTPLHLCKQLFETAEACEGLSGRSLRK
LPFLAHAALANPYGCDPSKFLSTMTDTARRERSELPD
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgagcgctcccagtcccatggacgtctctatgcaaaacccccaagacgtcgatgtccca
gaccaaaacggcgccgtcgcaatagactcagctccttctcccattcttccccaagacaaa
gtcctcgtttcagtggaagtcagcctcaagccctccagcacagctcgggctgacgatgtg
cggtctgctgtagagagaatgcttgaaaagaggagtctgagctacactgacggacctgtg
ccggtgccgcttgatgatcagtttctgacagaaaatgtgcaaagaatctgtatttgtgac
acggatgagtgggtgcaaaaccatgacatccttttgttctggcaagtgaagcctgttgtg
catgtttttcagcttagcgaagagggagcatgtgaggatgtaagtggggatggacaacct
tccaccttcaacgaatggattcttcctgcaaatgaattcgatggcttgtgggaaagttta
atttatgaatcaggtctcaagcaaaggttggtgcggtatgcggctagtgcattgcttttc
actgagaagggcgtcaatcctttccttgtgtcatggaatcgcattgttcttttacatgga
cctccagggactggaaaaacttctctatgtaaagcgctggctcaaaaactatccattcgg
tttaactccagatacccacaatgccagttgattgaagttaatgcacattctttgttcagt
aaatggttctctgagagtggcaagttggttgcaaatcttttctcaaaaattcaggagatg
gtagaggaggaaagcaatctggtatttgttttgattgatgaagttgaaagccttgctgct
gctagaaaagctgctttatctggctccgaaccttcagattctattcgggtagtgaatgcg
ctactaactcagctggataaattgaaatcagcaccaaatgttataattctgacaacatcc
aacataactgctgctattgatattgcgtttgttgatcgagctgatatcaaagcatatgtt
ggtcccccaactttgcaagcgcgttatgaaatcctaagatcctgcttgcatgagcttata
cgaacaggaattttatcacatctagaggattgtgatagcatgcttcctaactttgctagc
ttgagagagaaattgaatatgcctgaggtacaagatgcccagacaccactacacctgtgt
aaacaattgttcgaaactgcagaagcatgcgagggattgagtgggcgatccttaagaaag
cttccgttcctagcacatgcggctcttgcaaatccttacggttgcgaccctagcaagttc
ttgagtacaatgacagatacggctaggagggagcgttctgagctacctgactga

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