Entry |
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Name |
(RefSeq) cell division cycle protein 48 homolog
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KO |
K13525 | transitional endoplasmic reticulum ATPase |
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Organism |
mdm Malus domestica (apple)
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Pathway |
mdm04141 | Protein processing in endoplasmic reticulum |
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Brite |
KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103455303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mdm03019]
103455303
03009 Ribosome biogenesis [BR:mdm03009]
103455303
04131 Membrane trafficking [BR:mdm04131]
103455303
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:mdm04147]
103455303
Messenger RNA biogenesis [BR:mdm03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103455303
Ribosome biogenesis [BR:mdm03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103455303
Membrane trafficking [BR:mdm04131]
SNARE
SNARE associated proteins
Others
103455303
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103455303
Exosome [BR:mdm04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103455303
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
14:complement(join(26103332..26103634,26103915..26104274,26104410..26104691,26104774..26104845,26104978..26105199,26105298..26106064,26106181..26106409,26106511..26106676,26107289..26107347))
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AA seq |
819 aa
MAPLSPSAPDRSQPSSSSDPKSNKKDFSTAILERKKSPNRLVVDEAVNDDNSVISLHPAA
MEKLQFFRGDTVLIKGKKRRDTICIIIADDECEEPKIRMNKVVRANLRVRLGDVVSVHPC
PYVKYGKKVHILPIDDTIEGVTGSLFDAYLKPYFVDSYRPTRKGDLFLVRGMMRSVEFKV
METDPAEYCIVAPDTEIFCEGEPVKREDEERLEDVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGTGKTLIARAVANETGVFFVLINGPEIMSKMAGESESNL
RKVFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGA
TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKRMKLADDVDLERVAKDTHGF
VGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTSLSSTNPSALRE
TVVEVPNVSWDAIGGLDNVKRELQETVSIPVEHPEMFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIASECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR
GNSVGDAGGAGDRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPISKDIDLAALARYTHGFSGADITEICQRACKYAIREDIEKD
IERERRKNANPEAMEEDEIDEVAEIKPAHFEESMKYARRSVSDADIKKYQLFAQTLQQSR
GFGSEFRFPAQQTENNAGEAALSPFSSAAVAGEEADLYD |
NT seq |
2460 nt +upstreamnt +downstreamnt
atggcgcctctgagtccatctgctcctgatcgttctcagccctcttcgtcttcggacccg
aaaagcaacaagaaagatttttcgactgctattttggaacgaaagaagtctcctaatcga
cttgttgtcgatgaagctgtcaatgatgataattctgtgatttccttgcaccctgctgca
atggagaagcttcagtttttccgtggagacactgttttaattaagggcaagaaaaggaga
gacacaatttgcattattattgccgatgatgaatgcgaggaaccgaaaatcagaatgaac
aaagttgtgagagctaatcttagggttcgccttggagatgttgtgtctgttcatccctgc
ccttatgtcaagtatggaaagaaggttcacatccttccaatcgatgatacaattgaagga
gtgacaggaagcttattcgatgcatatttgaagccatacttcgttgattcttaccggcct
acgaggaagggtgatcttttcctggttcggggcatgatgcgaagcgttgagttcaaggtc
atggagacagaccctgctgagtattgcattgttgcaccggatactgagattttctgtgag
ggagagcctgtcaaacgtgaggacgaggaaagactagaggatgtgggatatgatgatgtt
ggaggtgttagaaagcaaatggcccagatacgggagttagtagaactgcctcttagacat
ccgcagctcttcaaatcgattggagttaaacccccgaagggcattttactctatgggcca
cccgggactggaaaaactttgattgcaagggctgtagcgaatgagactggagtgttcttt
gttttgatcaatggacctgaaataatgtccaagatggcaggtgaaagtgaaagcaacttg
aggaaggtgtttgaggaagccgaaaagaatgcaccctcaatcatttttattgatgagata
gattctattgctccaaagagagaaaagacccacggtgaagtggaaaggcgtatagtttcc
cagctcctgactttaatggacggccttaagtcccgtgcgcatgtcattgtcatgggagca
acgaataggccaaacagcatcgaccctgctctgaggagatttggaagattcgatagagag
attgacattggcgtgccggatgaagttggaagattggaagttttacgaatccatacaaag
aggatgaaacttgcagatgatgttgatctcgaaagagttgcaaaagatacccatggtttt
gttggtgcagatcttgctgctctctgcacagaggccgcacttcagtgcatccgcgaaaaa
atggatgttattgatttggaagacgaaacgattgatgctgaggtgttgaattcgatggct
gtgacgaatgaacactttcagacctcattgtcctctacaaatccttctgccttgcgcgaa
actgttgtggaggtaccaaatgtttcgtgggatgccattggtgggttggacaacgtcaaa
agagaacttcaagagactgtttcaatccccgtggagcatccagagatgtttgagaaattt
ggcatgtcgccttctaaaggcgttctcttttatggaccgcctggctgtgggaaaaccctt
ctcgccaaggcaattgccagcgaatgtcaggccaacttcatcagtatcaaaggacccgag
ttgctaacaatgtggtttggagaaagtgaggccaatgtgcgcgagatatttgacaaggct
cgccaatctgctccttgtgttctcttctttgatgagctagactcgattgcaactcagcgt
ggaaattctgtgggagatgccggtggtgctggagacagagtcttgaaccaacttctaact
gaaatggatggaatgaatgcaaagaaaaccgtctttatcattggggcaacaaacaggcca
gatattattgacccggcattgctcaggcctggacgtcttgaccaacttatctacatccca
ctcccagatgaggcttcgcgccttcagatttttaaagcatgtttgcgcaagtcccccatc
tctaaggatattgacctagcagctcttgcccgttatacgcacggttttagtggtgcagat
atcactgagatatgtcaacgtgcctgcaaatatgccatcagagaagacattgagaaggat
attgagagggaaagaagaaagaatgctaaccccgaagccatggaagaagatgaaattgat
gaggtagccgagatcaagccagcacactttgaggaatcgatgaaatatgcccgaagaagt
gtgagtgatgcggacatcaagaagtaccagctatttgctcagactttgcagcaatctcgt
gggtttggatccgaatttcgatttcctgctcaacagacagagaacaatgcaggagaagct
gctctatccccattttcttcagccgcggttgctggagaggaagctgatctctatgattga |