Malus domestica (apple): 103455377
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Entry
103455377 CDS
T03194
Name
(RefSeq) vesicle transport V-SNARE 13-like isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103455377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103455377
Membrane trafficking [BR:
mdm04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
103455377
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Use1
Motif
Other DBs
NCBI-GeneID:
103455377
NCBI-ProteinID:
XP_070668102
LinkDB
All DBs
Position
14:complement(join(28417108..28417260,28417460..28417630,28417720..28417908,28418165..28418223,28418861..28418960))
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AA seq
223 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSSKCTAATAVDGGCEKKNQIIAEVKAGFEDADTLLRNMDLE
ARSLQPSVKAALLAKLRGYKADLNNLKSQLKRMASPVVNFAARDELLEPGSADSLTTSND
QRGRLLMTTDRLNQSTDRIKESRRAMLETEELGVSILQDLHQQRQSLLHAHNTLRGADES
ISKSKKVLTAMTRSMNRNKWIVGSIIGVFAVAILFILYLKITR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtgtttgaggggtacgagcgccaatactgcgagctctcagccaatctctca
agcaagtgcacggctgccaccgccgtggatggaggatgtgagaaaaagaatcagataatt
gcagaggtaaaagctggatttgaggatgcagatactttgcttaggaatatggaccttgag
gcaaggagtttgcagccaagtgtgaaggcagctcttcttgctaagctaagaggatacaag
gctgatttgaacaatttgaagagccaactgaagagaatggcatcacctgtcgtgaatttc
gcagctcgggatgaactgttggagcccggatcggcagattccttgacgacatcgaatgat
caacgaggaagattgttgatgacgactgacaggttaaatcagtcgacggacagaatcaag
gagagtagaagagcaatgctggaaaccgaggagcttggggtctcaatcctccaagatttg
caccaacaacgccagtcacttctacatgctcacaatacactccgcggggcggatgaaagt
atcagcaagagcaagaaggtgctgaccgccatgacgaggagtatgaacaggaacaaatgg
attgtcggctccatcatcggagtttttgccgttgcaatcttgtttatcctttatcttaag
attacgcgctag
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