KEGG   Malus domestica (apple): 103455508
Entry
103455508         CDS       T03194                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
mdm  Malus domestica (apple)
Pathway
mdm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103455508
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mdm01002]
    103455508
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103455508
   04121 Ubiquitin system [BR:mdm04121]
    103455508
Enzymes [BR:mdm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103455508
Peptidases and inhibitors [BR:mdm01002]
 Metallo peptidases
  Family M67
   103455508
Membrane trafficking [BR:mdm04131]
 Endosome - Lysosome transport
  Others
   Others
    103455508
Ubiquitin system [BR:mdm04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    103455508
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 103455508
NCBI-ProteinID: XP_008393322
LinkDB
Position
14:join(30021226..30021345,30022466..30022530,30022671..30022746,30022837..30023037,30023248..30023342,30023772..30023874,30023949..30023995,30024222..30024573,30024792..30024881,30024956..30025018,30025124..30025198,30025489..30025551,30025715..30025767,30025890..30026064)
AA seq 525 aa
MRSSSSSDRINIAASAQRLDVDNRIPLRIYFRIANNVLKQADIFRHEKNIIDLYIMLLRF
SSLVSETIPCHRDYRASVQGEKVFLKKKLFDALNELEELKPAVKQKFKPTVKQKSDEFNR
IYGKLNNGWSHNHQIDFVASPLKKQSLISYDATKAAGPAARELVHQPLRSQQFSYARPLE
HQFRKLSIVPRPNEETLSRHSVLGPNGLNGQWQPPKSDIGVQYPSILDLTPVEIPRLGQS
IEDEHTIIKDEKTNINDASDLEPERSSLEPILTQTTDGGQKDCTAELCSLISFESTETPD
DTKLVRQPSPPPVLAEVQDLIPAISSQASEVECGLETLSSDELRAESPLELHISTTMMEH
FMKLAKSNTDKSLETCGILGGSLKNRKFYVTALIIPKQESTSNSCQATNEEEIFEVQDKQ
SLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPEAVAIVMAPQGGSRTHGIFRLTNPGG
MSVIRQCQHRGFHPHDQPPDGGPIYKTCADVYMNPDLKFDVIDLR
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaggtcgtcgtcttcttccgatagaattaacattgctgcgagtgctcagagactcgat
gtcgacaatcggattcctctgcgtatttactttcggatcgcaaacaatgtcctcaagcag
gctgacatatttcgacacgagaagaatattatagacctatacattatgctactaaggttt
tcaagtttggtctctgagacaataccgtgtcatcgagactatagagcatctgttcaagga
gagaaggttttcttgaaaaagaaattgtttgatgctctgaatgagctcgaggagctcaag
ccagcagtgaaacagaaatttaagccaacagtgaaacagaagagcgatgagtttaacaga
atatatggaaagttgaacaacgggtggagccataatcaccaaattgattttgtggcatcc
cctctcaagaagcaatctttgattagctacgatgcaaccaaggcagcaggaccagctgca
agagaacttgtccatcaacctctaaggtctcaacaattttcctatgccaggcctttggag
catcaatttcgcaaactatccatagttccacgtccaaatgaggaaactctttccagacat
tctgttttgggcccaaatgggcttaatggacagtggcagccacccaaaagtgatataggg
gttcagtatccaagtattttagacttgactcctgttgaaatcccaagactggggcagtcc
atagaagatgaacatacaattataaaagatgaaaagacaaatataaatgacgctagcgat
ttggaacctgaaaggtcaagtttggaaccaattcttacccagactactgatggtggccag
aaggattgtacagcagaactttgctccctcatttcttttgaatcaacagaaactcctgat
gatacaaaacttgtcagacagccttctcctccgcctgttcttgcggaagtacaagatttg
atcccagcaatttcatctcaagcctctgaggtagaatgtggactggagactctttcatca
gatgaacttcgtgctgaatctcccctggaattacatatttcaacaacaatgatggaacat
ttcatgaagctggctaagtcaaatactgacaagagcttagagacttgtggcatcctagga
ggctcactaaaaaacagaaaattttatgttacagctctcatcatacccaaacaggagtca
acttcgaattcgtgtcaggccacgaatgaagaggaaatatttgaagttcaggataaacaa
tctctctttcctcttggctggatacatacgcatcctacacagtcttgcttcatgtcgtcg
attgatctccatacccattattcatatcagattatgttgccggaagctgttgcaattgtc
atggcaccacaaggtggttcaagaacccatggcattttccgattgacaaacccaggcggc
atgtcagtcattagacagtgccagcaccgtggttttcatccacacgatcagccaccagac
ggtggacccatttacaagacctgtgcagatgtttatatgaaccccgatctaaagtttgac
gttattgatcttcgatag

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