Malus domestica (apple): 103455661
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Entry
103455661 CDS
T03194
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103455661
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103455661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_4
zf-met
zf-H2C2_2
DUF2524
Motif
Other DBs
NCBI-GeneID:
103455661
NCBI-ProteinID:
XP_008393465
UniProt:
A0A498I7X0
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All DBs
Position
14:complement(join(31126934..31127939,31128987..31129386,31129621..31129726))
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AA seq
503 aa
AA seq
DB search
MLPNNSSSLVPSSDPFSCLENGNTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICEIC
NQGFQRDQNLQMHRRRHKVPWKLLKRETPVVKKRVFVCPEPSCLHHDPCHALGDLVGIKK
HFRRKHSNHKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC
NMDRVRPESQTLQPAACLSRTASSPSPSCSDNNFSRAPSTWPPSNNLVLPHPSPTEYTKL
ILINPPDHADHHQATLSKKNSSNAHYNLDLQLATTSNINIPINEVSVSSKREENHSTQLQ
LSIGSCEFGGGDRSHQNKTIEQHSNIMIANRNYSPRRNEVKERERESSSTTTNHHEHDDD
GQKPKPATVAAGILRLKEEAREQLRLAMAEKAYAEEARQQAESHIKLAEKEFANAKRIRQ
QAQAELDKAHALKEQAVKKVNSTILQITCHACKKQFMQGAHEATTNQHSLVLSYMSSAIT
SEGDHRLEKDISTRTHHAKSASA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttacccaataactcttcttccttggtcccttcttctgatcctttttcttgcttagaa
aatggcaacaccaataaaagaaagagaagacctgcaggcactccagatccagatgcggag
gtggtgtcactttcgccgaaaaccttactggaatcggatcgttacatttgcgagatctgc
aaccaagggtttcagagagaccagaacctacagatgcaccggcggcggcacaaggtgcca
tggaagctgctgaagcgagagactccggtcgtgaagaagcgggtgttcgtgtgcccggaa
ccaagctgcctgcaccatgatccctgccacgccctcggcgatctcgtcggcatcaaaaag
catttcaggagaaagcacagcaaccacaaacagtgggtttgtgataagtgctcaaaaggg
tatgcagttcaatcagattacaaggcacatctcaaaacctgcggcaccagaggacattct
tgcgactgcggccgtgttttctctagggttgagagtttcatagagcaccaagacgcttgt
aacatggatcgtgtgcggccggaatcacaaacgctgcaaccggcagcatgcctgtcacga
acggcttcaagtcctagtccatcctgcagtgacaacaatttcagcagggctccatccact
tggcctccatctaataatttggtactaccacatccaagtccaactgagtacaccaaatta
atcttaataaaccctcctgatcacgctgatcatcatcaagctacattgtccaagaagaat
agtagtaatgcacattacaatttggatcttcagctcgcaaccacgtcgaatattaatatt
cctatcaatgaagtatctgtttcgtctaagagagaagaaaaccattccactcagctgcag
ctctcaattggttcatgtgaatttggcgggggtgatcgtagtcatcagaacaaaactatt
gaacaacattcgaacattatgatcgcgaatcgaaattactccccgaggaggaacgaggtg
aaggaaagggaaagggaaagcagcagtactactactaatcatcacgagcatgatgacgat
ggtcagaaacctaaacctgccaccgtggctgctgggatattgaggctgaaagaagaagcg
cgagagcagttaaggcttgcgatggcggaaaaggcttacgccgaagaggcgaggcagcaa
gcggagagccacatcaaactggcggagaaggagtttgcaaatgccaagagaataaggcaa
caagcacaggccgagttagacaaggctcacgctttgaaagagcaagcggtcaagaaagtg
aactctaccattctccaaatcacttgccatgcctgcaagaaacagtttatgcaaggtgcg
catgaagcaacaaccaatcaacattctctggttttgagttacatgtcatcggctataacg
tcagaaggtgatcatcgattagagaaggatatcagtactcgaacccatcatgcaaaatct
gctagcgcctaa
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