KEGG   Malus domestica (apple): 103455752
Entry
103455752         CDS       T03194                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103455752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103455752
Spliceosome [BR:mdm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103455752
 Complex B
    103455752
 Complex C
   U2 SnRNP specific factors
    103455752
SSDB
Motif
Pfam: RRM_1 RRM_5 DUF8400 RRM_MUD2_C RRM_10 RBD_AKAP-17A RRM_7 RRM_11 F07F6_N
Other DBs
NCBI-GeneID: 103455752
NCBI-ProteinID: XP_008393562
LinkDB
Position
15:3145661..3146035
AA seq 124 aa
MSAISLRKVNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIHIGTNKDTRGTA
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMGKKSDTKKEEDEIARMQEKYGVS
TKDK
NT seq 375 nt   +upstreamnt  +downstreamnt
atgagcgcaatcagcctacgcaaagtcaacacccgcctccctccggaagtcaaccgcgtg
ctctacgtccgcaacctccccttcaacatctcgagcgaggagatgtacgacatcttcggc
aagtacggcgcaatacggcagattcacatcgggacgaacaaggacaccagaggcaccgca
ttcgtcgtttacgaggacatctacgacgccaaaacggcggtggatcacctctccggcttc
aacgtcgcgaaccggtacctcatcgtgctctactaccagcaggcgaagatgggcaagaag
tccgacacgaagaaggaggaggacgagatcgccaggatgcaggagaagtacggcgtctcc
accaaagataagtga

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