KEGG   Malus domestica (apple): 103456107
Entry
103456107         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
mdm  Malus domestica (apple)
Pathway
mdm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103456107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103456107
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103456107
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 Zn_ribbon_RanBP GTP_EFTU_D4 Mg_chelatase fragilysinNterm
Other DBs
NCBI-GeneID: 103456107
NCBI-ProteinID: XP_008393965
LinkDB
Position
15:complement(join(7670259..7670390,7670506..7670640,7670731..7670970,7671604..7671772,7672328..7672815,7672894..7673004,7673108..7673577,7674052..7674129,7674308..7674529,7674863..7675021,7675444..7675552))
AA seq 770 aa
MPRKVNYGIDYDDGYDAYEDHDYDYDDDDEYGIEKNVTGKAVESKRETERPKVWSCSICT
YDNEENTSACDICGVLRNPLSKSNRDNKTVEGRCKDSGVSIMAKSIFASLPHQKPKQAVL
FHQQKDDSMIEEGNNFHRLGDFKGPIHEFLNTFNVHNKHRIDIAPFKFDVPSPDDVVYNG
LWSSKTGSKAGVIDLKSSKASPNVAKKSSAVSAQSSAEWSGSSSTMAQKREQGRLDKEIQ
LENQTVSYHHGSSGAITIQENGKFSESSSASQPTSRRDSGVESTSEIRGKSQSVTSGLKN
MTLDARSGYSNSVSVRESRSQADYKPEKWMLPDQAIDTLTQLNLAIVGHVDSGKSTLSGR
LLHLLGRISQKEMHKYEKEANLQGKGSFAYAWALDESTEERERGITMTVAVAYFDSRKYH
VVVLDSPGHKDFVPNMISGATQADAAILLIDASVGAFEAGMDVGKGQTREHAQLIRSFGV
DQIIVAINKMDIVEYSKDRFDLIRQTLGTFLRSCGFRDSSVSWIPLSAMENQNLVAAPSD
VRLSSWYRGPYLLDAIDSLKPPTREFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSG
FKVLVMPSGESGTVRLLERDSQACAIARAGDNVAVTLQGIDGGRVMAGGVLCHPSFPVAV
AKHLELKVLVLDVTTPILIGSQLEFHIHHAKEAARVVKISSLLDPKTGKLTRKAPRCLTA
KQSAVVEVSLHAPVCVEEFSNSRALGRAFLRALGSTIAVGVVTRIIEEQK
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgcctcgtaaagtaaactacggaattgattatgatgacgggtacgatgcttatgaagat
catgattatgattatgatgatgatgatgagtacggaatagaaaagaatgtaacaggcaaa
gcagttgagtcaaagcgcgaaactgaaaggcctaaggtctggagttgttccatttgcacg
tatgataatgaagagaatacgtctgcatgtgacatttgtggggttcttcgcaaccctttg
tctaaaagcaatagagataataaaacagttgaaggcagatgcaaagattctggagtatcc
ataatggccaagtctatttttgcatcattgccgcaccagaagccaaaacaggctgtacta
tttcatcagcagaaagatgattctatgatagaagagggcaataacttccacaggcttggg
gatttcaaaggacctattcatgaattccttaacacttttaatgttcataacaaacaccgt
attgatatagctcctttcaagtttgatgttccatccccagatgacgtggtttataatgga
ttgtggtcctccaaaacaggttcaaaagctggtgttattgacttgaaatcttcaaaagct
tccccaaatgttgcgaagaagagtagtgcagttagtgcacaatcaagtgctgaatggtca
ggtagttcatctacaatggcacaaaaaagggaacaaggtagattagataaggaaattcag
ttggagaatcagacagttagttatcaccatggaagtagtggcgcgattactatacaagaa
aatggtaaattttcagagagttcatctgcttcgcagccaacaagcagacgtgacagtggg
gttgagagcacttctgaaattaggggcaagtcacagagtgttaccagtggcttgaaaaac
atgactttggatgctcgatctggatattctaatagtgttagtgttagagaatctcgttca
caagcggactataaacctgagaagtggatgcttcctgaccaagctatagatacactgact
caactgaatcttgcaatagttggtcatgttgattctggaaaatcaacactctctggtagg
ttgcttcaccttttgggaaggatatctcagaaagaaatgcacaaatatgagaaagaggca
aacttgcagggaaaggggtccttcgcatatgcttgggcattggatgagagtaccgaagaa
agggaaagaggaataactatgacagtggctgttgcatactttgattccagaaaatatcat
gttgttgtgctcgactctcctggccataaagattttgttcctaacatgatatctggggca
acacaagctgatgctgcaatacttctcatagatgcctctgttggtgcattcgaagctggt
atggatgttggcaagggacagacaagggagcatgcacaacttattagaagttttggtgtt
gatcaaattatagttgctattaacaagatggatattgttgagtactccaaggatcgattt
gatttgatcagacagacacttggaacatttctccgttcctgtggtttcagagattcttcg
gtgtcttggattccattgagtgccatggaaaatcaaaatttggtagcagctccttctgat
gtccgtttatcgtcttggtaccgtggaccttacctgttggatgcaattgattccctcaaa
cctcctacaagagagttttcaaagccattgctgatgcctatatgtgatgtcatcaaatct
tcttcacaaggacaggtgtctgcttgtggtaaattggaagcaggagctcttcgaagtgga
ttcaaggttctggttatgccttcgggagaatcagggactgtacgcttgttagaacgtgac
tctcaggcttgtgcaattgcaagggctggggacaatgtggctgttactctgcaaggcatt
gatggaggtcgtgtgatggcaggaggtgtgctctgtcaccctagttttccggttgcagtt
gcaaaacatttggaattgaaggtgcttgttttggatgttacaaccccaattttaattggt
tctcagttggaattccacatacaccacgcgaaggaggctgcgagagtggtaaagatttca
tcattgcttgatccaaagactggaaaactgacaagaaaggctcctcgctgtcttactgca
aagcagagcgcggtcgtagaggtcagtcttcatgcaccggtttgtgttgaagagttctcc
aactccagagcccttgggagggcctttttaagggcgttaggaagcaccattgctgtcggt
gttgtaacccggattatagaggagcagaagtag

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