Malus domestica (apple): 103456147
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Entry
103456147 CDS
T03194
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
mdm04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103456147
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103456147
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103456147
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103456147
03036 Chromosome and associated proteins [BR:
mdm03036
]
103456147
Protein phosphatases and associated proteins [BR:
mdm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103456147
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103456147
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103456147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
Gem4_1st_TPR
Motif
Other DBs
NCBI-GeneID:
103456147
NCBI-ProteinID:
XP_008394018
LinkDB
All DBs
Position
15:join(8226508..8227689,8227932..8228288)
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AA seq
512 aa
AA seq
DB search
MLKQFLSKLPRKALKSDERPESPRTNMPRSGSRTGPSGLGGGTPRSNGGNNSGPGKANAP
KRMSSAVFPASVVAGIEPLVPFKDVPTPEKMNLFVSKVSLCCVTFDFTDPTKNSIEKDVK
RQTLLELVDFVAIGSMRFSEPAILATCRMCAINLFRVFQPNYRSHSNGGAGENDDDEPMF
DPAWPHLQIVYELLLKFVTSSCLDAKVAKKYVDHSFILRLLELFDSEDPRERDCLKTILH
RIYGKFMVHRPFIRKAINNIFYRFLFETDRHNGIAELLEIFGSIISGFALPLKEEHRVFL
WRVLIPLHKPKNLGSYFQQLSYCVTQFIEKEPKLASVVIKGLLKYWPITGSQKEVMFLGE
LEEILESVNMVEFQKIMAPLFCRIACCINSSHFQVAERALFFWNNDNIVNLIAHNRQVIL
PIILPALERNSQNHWNQAVLNLTLNVRKMFVEMDDQLFLSSHAHYMEEEAKQSSAAKKRK
EAWEQLENAASLQPVTGNTAVLVTPIATSIAC
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcaattcctcagcaaactgccgcggaaggccttgaaatccgacgagcggccc
gagtcgccgcggacaaacatgccccggtccgggagtcggactgggccgtcgggtctgggc
ggtggcacccctcgatccaacggcggaaataattcgggcccaggtaaagcgaacgcaccg
aaacgcatgtcgtccgcggtgtttccggcgagcgtggtggccggaatcgagcctttggtg
ccgttcaaggacgtgccgacgccagagaagatgaacctcttcgtcagcaaggtgagcctt
tgctgtgtaacgtttgatttcacagacccaactaagaattcgatagagaaagatgttaag
aggcagacattgcttgaacttgtagactttgtagcaattgggtcgatgagattcagcgag
ccagccattttagcaacctgtagaatgtgtgccattaatctgtttagagttttccagcca
aattaccggtcccattccaacggcggggcgggtgagaacgatgatgatgagcccatgttc
gaccccgcctggccgcatttgcagattgtgtatgaattgctgcttaaattcgtgacatct
tcgtgtcttgacgcgaaggttgcgaagaagtatgtagaccattcgtttattttgaggttg
cttgagttgtttgattccgaggaccctagggagagagactgtttgaagaccattctgcat
aggatttatggcaagttcatggttcataggccgtttattcgcaaggctatcaacaacata
ttctatcggtttttgtttgagaccgatagacataatgggattgctgagttgctggagata
tttgggagtattattagtgggtttgcgttgccgttgaaagaggagcacagggtattcttg
tggagggttttgattcctcttcataagccgaagaatctagggtcttacttccaacagttg
tcctattgcgtcacgcagtttatagagaaggagccgaagttggctagtgttgttataaag
ggtttgttgaaatactggccgataacaggtagtcagaaagaggtgatgttcttgggtgag
ttagaagagattttggaatcggttaacatggtggaatttcagaagatcatggcccctttg
ttctgccggattgcatgctgcattaacagttcccacttccaggtagctgaaagggccctt
ttcttttggaacaatgacaacattgtgaacttaatcgcacataaccgtcaagtgattctg
ccgatcattttaccagccttggagaggaactcccagaaccactggaaccaagcagttctt
aatttaactttaaatgtccgaaagatgtttgtcgagatggatgatcagctattcctctcc
agccacgcgcactacatggaggaagaagcaaagcaaagctcggctgccaagaagcgaaag
gaagcatgggagcagttagagaatgcagctagtctccagccagtaaccggaaacactgca
gttctggtaacgcctatagcaacctcaatcgcctgttaa
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