Malus domestica (apple): 103456226
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Entry
103456226 CDS
T03194
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103456226
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdm01007
]
103456226
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103456226
Enzymes [BR:
mdm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
103456226
Amino acid related enzymes [BR:
mdm01007
]
Aminoacyl-tRNA synthetase
Class I (G)
103456226
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103456226
Prokaryotic type
103456226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
tRNA-synt_1f
DALR_2
Motif
Other DBs
NCBI-GeneID:
103456226
NCBI-ProteinID:
XP_008394123
LinkDB
All DBs
Position
15:complement(join(9413086..9413322,9413487..9413588,9413834..9414037,9414356..9414481,9414628..9414909,9415142..9415312,9415478..9415639,9415949..9416012,9416099..9416442))
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AA seq
563 aa
AA seq
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MSTLLRFYRPLFPYSTRKIQLGTQRFHSLLKPNRRIRCVATSSHSQPSIVGGGGSKPESP
ESSELWLHNTMSRKKELFRPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHL
GYQVTYVRNFTDVDDKIIARANELREDPISLSRRYCEEFNQDMTCLHCLPPSVEPRVSDH
MPQILDMIKQIIENGYGYSVDGDVYFSVDKFPDYGRLSGRKLEDNRAGERVAIDSRKKHP
GDFAMWKSAKEGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENE
IAQSCAACNHSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHY
QSPINYSDALLESASDRIFYIYQALHDCESALSQNNGVTLKDTIPPDTLNSINNFYNIFV
TSMSDDLHTPVVLAALSDPLKTINDLLHTRKGKRQELRMESLAALGKIIKNVLSILGLMP
ASYPEILQELKDKALKRAKLTEDQVLQKIEERNAARKNKEYERSDTIRKDLAAVGIALMD
SPDGTTWRPAVPLAIQEQQVATT
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcactctgctcaggttctacagacccttgttcccatactcgactcggaagattcaa
ctcggaacgcagcgtttccacagcttattgaagcccaataggagaattcgctgcgtggct
acttccagccactctcagccgtctattgtaggcggcggcggcagtaaaccggagagtcca
gaatcgtcggagctatggcttcacaacacaatgagcaggaagaaggagcttttcaggccc
aaaattgaagggaaggtgggcatgtatgtgtgcggagtcacagcctatgatctcagccac
atcggccatgcgcgcgtctacgtcacattcgatgttctctacagatatcttaggcatttg
ggatatcaagtcacatacgttcggaatttcacagatgttgatgacaaaataattgctaga
gcaaatgagttgagggaggatcctatcagcttgagcaggcgctactgcgaggagttcaat
caagatatgacctgtctgcattgcctgcctccttcggtggaaccacgagtgtccgatcac
atgccacagatccttgatatgataaagcagattattgaaaatggatatgggtacagtgtt
gatggggatgtttactttagtgttgacaagttcccagattatgggcgtctatctgggcga
aagttagaagataatcgagctggtgagcgggttgctattgattcaaggaaaaaacatcct
ggtgactttgccatgtggaagtctgcaaaggaaggagaacccttctgggacagtccatgg
ggccctggtagacccggctggcatatcgagtgcagtgcaatgagtgctgcttatctgggt
tactctttcgacatacatggtggagggatggaccttgtgtttccccaccatgaaaatgaa
attgcacagagttgtgctgcatgtaaccacagtaacataagctactggatacacaatggt
tttgtcaccattgactcagagaaaatgtccaaatcccttggaaacttcttcacaattcgg
caggttatagacctctaccatccattggctttgcgacttttcttgttagggacccactat
cagtctccgatcaactactctgatgcgctgcttgaaagtgcttcagaccggattttctac
atttatcaggcattacatgattgtgaaagtgctctgagccagaataatggggtaaccctg
aaagataccatccctcctgatacactgaacagcatcaataacttctataacattttcgta
acgtcaatgtcagatgatcttcacactcctgttgttttggctgcactatcagacccatta
aaaactatcaatgatctgctacatactcgtaaggggaagaggcaagaactgcggatggag
tcgctggcagctttgggaaagataattaagaatgttttgagcattttaggactgatgcct
gcaagctacccggagattctgcaggagctgaaggataaagccttgaagcgtgcaaagtta
accgaagatcaagtattgcaaaaaatcgaggaaagaaatgcagcgaggaagaacaaagag
tatgaaagatcagatacaattagaaaagatttagctgccgtggggattgctcttatggac
agcccagatggaacgacgtggagacctgccgtacctcttgcaattcaagagcagcaggtt
gcaactacttga
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