KEGG   Malus domestica (apple): 103456355
Entry
103456355         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03022  Basal transcription factors
mdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103456355
  09124 Replication and repair
   03420 Nucleotide excision repair
    103456355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103456355
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103456355
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103456355
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103456355
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 103456355
NCBI-ProteinID: XP_028950633
LinkDB
Position
15:join(10951994..10952058,10952487..10952560,10952644..10952747,10952927..10952992,10953115..10953387)
AA seq 193 aa
MVVTNSNSQNREIVVRKRIASIFNKREEDFSSLREYNDYLEEVEDMTFDLIEGIDVPAIE
AKIAKYQEENAEQIMINRARKAEELAAALAASKGHPIQNETDAGLSQGSQAGFGAGTQGQ
YAPTVSGQPRPTGGMGPQPLPLGGGGHDLHGYAVDDEEMVKLRAEKGGRAGGWSGEISRK
RALEEALGSIWIC
NT seq 582 nt   +upstreamnt  +downstreamnt
atggtggttaccaattctaattcccagaacagggagattgtggtcaggaagaggattgca
agcatattcaataaacgagaagaggatttttcttccttgagagaatacaatgattacttg
gaggaagtggaggacatgacatttgacttgatcgaaggaatagatgttcctgctattgaa
gcgaaaattgccaagtaccaggaagaaaatgccgaacaaataatgattaacagagctcgt
aaggctgaagagcttgctgcagctctcgcagcaagcaagggacatcccatacaaaatgaa
actgatgcgggtctgagccaaggctcacaagcaggatttggtgctggtacacagggccag
tatgctcctacagtttcagggcaaccacgtccaaccggcggcatgggtccacaaccacta
ccacttggaggaggggggcatgatctgcacggatacgccgttgacgatgaagaaatggtg
aagctgcgagcagagaagggtggtcgggcaggagggtggagtggagagataagcaggaag
agggcacttgaagaagcccttggtagcatttggatttgttag

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