Malus domestica (apple): 108174174
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Entry
108174174 CDS
T03194
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108174174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
108174174
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108174174
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108174174
NCBI-ProteinID:
XP_028960184
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All DBs
Position
01:complement(join(30902826..30903560,30903705..30903819,30903938..30904200,30904411..30904611,30905409..30905847,30905942..30905967))
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AA seq
592 aa
AA seq
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MAMEVQIPRLHHCDLEKNAAEKFPKNIREALKKFPKKKHLDLREFVLQRWNQIVLVFCVI
ALSTDPLFLYLLTVNNEQNCLTLDKTLATVTALLRFSIDFFYIFHIIFQFRASNVAHSFQ
ASRQGESVAETRARARKYLLMYLLLDMLIILPLPQVLVFAVIPKTKHSRAFFVASISKNM
FVLQYLLRVFRICSSLKVALRGSSILAESAWANLFLFMLAGHVTGAFWYFFSIERITKCW
GEACEYHGGAHCYLFCDDTFAAKAFADDSCSTNTTNSGIYSDALESIVLDSTPFVKRISY
CFWWGIQNLSSLGQSLKPTTIYIWEIYFSLVVSITGLVLLAILAGNLQKYVLSKIARSEE
MRLKKPEIELWMYFHSLPGSLKARIWQSMKHKLKENIRIDVENFLHLLPVELCKDIKWHL
CSGPLREVPILQTMDEQLLEAICKHLTPVLYAKNSIIFHEGEPLAEMLFVTRGKLLTYTA
SATARVRFLGKGDYFGEELFDWVLINCASLSNFPLSTETVKAQTEVEVFVLRAQQLKTVV
SKFWWLFTKEQRRHSSLNTSFNVEQWKPRAAYALQAAWRRHKKETSTVRRRR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaggttcaaattccgcggctacatcactgtgacttggaaaaaaatgctgca
gaaaaattcccaaagaatattagggaagcactgaaaaaattccccaagaaaaagcatctt
gatttacgggagttcgtcctgcagaggtggaatcagatagttttagttttctgtgttatc
gctctctcaaccgatcctttgttcttgtacctccttacggttaacaacgaacagaattgc
cttaccctggacaaaacattggcgaccgtaactgcgcttctgcgtttcagcatcgatttc
ttttatatatttcatatcatttttcaattccgtgcaagcaatgttgctcattcttttcaa
gcctctcgacaaggcgaatcggtcgcagagactcgggcaagagcacggaaatatttgttg
atgtacctactactcgacatgcttataattcttccacttccacaggtgctagtttttgct
gtcattccaaaaactaaacattcgagggctttctttgtcgcaagtatatcgaaaaatatg
tttgtacttcaatatctgctaagggtatttcgaatctgctcctcgttaaaagtagctcta
aggggttctagcatccttgccgaatctgcatgggctaatctctttctttttatgcttgcc
ggtcatgttactggagccttctggtattttttttctatagaaagaataacaaagtgctgg
ggagaagcctgcgaatatcatggaggtgcgcactgttatttattttgcgatgacacattt
gcagctaaagcattcgcagacgactcttgctctacaaacacaacgaattctggaatatac
tctgatgcccttgaatctatagttctggattcaactccttttgtaaaaaggatttcttac
tgcttctggtgggggatacaaaatctaagctccctcggccaaagcctcaaacccacaact
atctacatatgggagatatacttttcacttgttgtttcgataacaggcttggtgctactt
gcaattcttgctggaaatctgcagaaatatgtgctgtcaaaaattgcaagatcggaggaa
atgagattaaagaaaccagaaatagaattgtggatgtatttccactcacttcctggaagt
ctaaaggcacggatttggcaatccatgaaacacaaactgaaagaaaatatacgcattgac
gtggagaattttcttcaccttctacccgtggaactttgtaaggatataaaatggcatctc
tgctcaggtccactcagagaagtgccaatacttcaaaccatggacgaacaactgttggaa
gctatctgcaaacatctcacgccggtgctgtacgcaaagaacagcatcatttttcatgag
ggagagccacttgctgagatgctcttcgtcacacgcggtaagctattgacttacaccgcc
tctgctactgctagggtaagatttcttggcaaaggtgactattttggagaagagcttttc
gattgggtgctgatcaactgtgccagcttatctaacttccccttgtcaactgaaactgtc
aaggcgcaaacggaagttgaagtgtttgttctaagggcgcagcagttgaagacggtagtc
tctaaattctggtggcttttcaccaaagagcaacgccgccactcgagccttaatactagc
tttaacgtggagcaatggaaaccaagggcagcttatgctttgcaagcagcatggcgtcgc
cataaaaaggaaacctcgacggtgcgaaggagacgttaa
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