Malus domestica (apple): 114820171
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Entry
114820171 CDS
T03194
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
mdm
Malus domestica (apple)
Pathway
mdm03013
Nucleocytoplasmic transport
mdm03015
mRNA surveillance pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114820171
09122 Translation
03013 Nucleocytoplasmic transport
114820171
03015 mRNA surveillance pathway
114820171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
114820171
03041 Spliceosome [BR:
mdm03041
]
114820171
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114820171
Spliceosome [BR:
mdm03041
]
Complex C
Other components
EJC/TREX
114820171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
114820171
NCBI-ProteinID:
XP_028946430
LinkDB
All DBs
Position
12:join(9272948..9273131,9274149..9274285,9275583..9275719,9276229..9276274)
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AA seq
167 aa
AA seq
DB search
MEGHCDDDPMEEEVVEAMPRRIKGRGGLRAPSKTLDLDHPNNPPSFPRCNASQSPAYAPQ
RSIEGWIILITGIHEEVQEDDLFNVFGDYGAIKDLHLNLDRRTGFVKGYVLIEYEKFEEA
KAAISGMNGAKLFGQTISGDWAFSTGSFGGNLRSPESNRSRSPRRRY
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccactgcgacgacgatccaatggaggaggaagtggttgaggcgatgcctagg
agaatcaaaggcagaggaggtttaagggccccatccaaaaccctagacctagaccacccg
aacaaccctccttctttcccccgttgcaatgcctcccaatctccggcttacgctcctcaa
cgctctattgaaggatggatcatattgatcactggaatacatgaggaggtacaggaagat
gatctttttaatgtatttggcgactatggagcaatcaaggatttgcatctgaatcttgac
cgtcgcactggatttgttaagggttatgtgctgattgaatatgagaagtttgaagaagct
aaggcagcaatatcgggaatgaatggtgccaaactttttggtcaaaccatatctggtgat
tgggccttcagtactggttccttcggaggcaatttaaggtcaccggaatcaaaccgttct
cgaagtccaaggaggagatactga
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integrated database retrieval system
