KEGG   Malus domestica (apple): 114822017
Entry
114822017         CDS       T03194                                 
Name
(RefSeq) autophagy-related protein 18B
  KO
K17908  autophagy-related protein 18
Organism
mdm  Malus domestica (apple)
Pathway
mdm04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    114822017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    114822017
   03029 Mitochondrial biogenesis [BR:mdm03029]
    114822017
Membrane trafficking [BR:mdm04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    114822017
Mitochondrial biogenesis [BR:mdm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    114822017
SSDB
Motif
Pfam: PROPPIN Beta-prop_IFT122_1st WD40_Prp19 BCAS3_WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR3_2nd WD40_MABP1-WDR62_1st Beta-prop_RIC1_2nd WDR54 Beta-prop_IFT140_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 114822017
NCBI-ProteinID: XP_028951720
LinkDB
Position
16:join(30245461..30245510,30245615..30245688,30245799..30245872,30245948..30246057,30246350..30246441,30246545..30246657,30247183..30247302,30248496..30248641,30249625..30249738,30250665..30250730,30251151..30251292)
AA seq 366 aa
MASPYPIYCASFNQDTSCFAIGTRGGFKIFDSSTGRLCYERAIGAFVIVEMLFSSSLLAI
VGAGEEPSLSPRRLCLFNTTTATALRELNFLTSILAVRMNKKRLVVILQDKTYVYDINSL
AILDTIDTIPNIKGLCAFSPSLEGCFLALPASISKGSVLLYNVMDRHLHCEIDAHRSPLA
AIALSSNGIYIATASEQGTIIRVHLVSEATKSYSFRRGTYPSTIFSLSFGPSMQLPDILV
GTSSSGSVHAFSLGFSIYQRSKRSGSFLGSIIPDSVTDALDPAHHDVLHNAAPAGVKSYA
VIRKVDKVADTSTSEIVACRATISIISYNGYFQEYNLSVNSQNEFVWSLEREFKLLAVIT
DDSTSS
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcctctccttacccaatttattgcgcttccttcaaccaagacaccagttgctttgca
atcggcacaaggggcggcttcaaaatattcgattccagtactggcagactctgctatgag
cgagctattggagctttcgttatagtagaaatgctttttagctctagtcttcttgccatt
gttggagctggtgaagagccatccctatcgccccgccgcctctgtttgttcaataccaca
actgcaactgctcttcgagaattaaatttcttaacttccatacttgctgttcgcatgaat
aagaagagacttgttgtcattttacaggacaaaacatacgtatatgacataaatagtctc
gcaatcttggacactattgatactataccaaatataaaagggctttgtgcattctcacca
agtttggaagggtgctttttggctcttcctgctagcatctcgaagggatctgtgttgttg
tacaatgtcatggaccggcatttacattgtgagatagatgcgcatcgatccccacttgct
gcaattgccctttcttccaatggaatctacatagcaacagcatctgaacagggaaccatt
atcagagtccatctagtctcagaagcaactaagtcgtatagctttcgaagagggacatat
ccatcaactatattttctttgtcatttgggccatctatgcaactgccagatattcttgtg
ggaacaagttcttcaggttctgttcatgccttttctctggggttctccatttatcaaaga
agcaaaagatcagggagttttcttggatcaattatacccgactctgtgactgatgcatta
gatccggcacatcatgatgtacttcataatgctgcaccggcaggagtcaaaagctatgca
gtgatacgaaaggtagataaggttgctgatacatcaacttcagaaattgtggcttgtagg
gcaactatttccatcataagctacaatgggtacttccaggagtacaacttaagtgtcaac
agtcagaatgagttcgtgtggagcttggagcgcgagttcaagctacttgctgtcatcaca
gatgattccaccagctcatga

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