KEGG   Malus domestica (apple): 114822098
Entry
114822098         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03440  Homologous recombination
mdm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    114822098
   03460 Fanconi anemia pathway
    114822098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    114822098
Enzymes [BR:mdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     114822098
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     114822098
   FA (Fanconi anemia) pathway
    Downstream FA components
     114822098
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 Yippee-Mis18
Other DBs
NCBI-GeneID: 114822098
NCBI-ProteinID: XP_070671716
LinkDB
Position
16:complement(join(39010888..39010932,39011016..39011135,39011444..39011515,39011953..39012898,39013061..39013341,39013432..39013556,39013960..39014007,39014268..39014389,39014478..39014506,39014713..39014757,39014846..39015045,39015250..39015406,39015489..39015572,39015662..39015755,39015958..39016063,39016669..39016764,39016853..39016925,39017002..39017089,39017403..39017473,39017560..39017633,39017709..39017770,39018425..39018566,39018651..39018751,39018880..39018924,39019007..39019071,39019555..39019630,39019905..39019998,39020194..39020557))
AA seq 1274 aa
MVSATPGRNPNPTTKTSKNGYQIGGVQVEFPYHPYGAQLAFMSRVISTLDRAHRDGHCHA
LLESPTGTGKSLSLLCSTLAWQQAYKSKNQFANLLHSKPDPKAMTDPAAHGGGFVPEEEP
SSVQLSEKAKTKQSLANNKDEKKKATPTIYYASRTHSQISQVIREYRKTSYRVPMAVLAS
RKHYCTNAQVHGKENIDEECKLLLKNREVGCLEFKNVNKVKGHPSLQKGGCHEAHDIEDL
VKVGKSVKGCSYYAARSLSDDAELVFCPYNYIINPVIRGAMEVDIKGSIVVLDEAHNMED
VARDAGSVDIEEDILHKLQIELEQLCPVDVLVYQPLYETIQGLISWIEQRKNKLEKREFQ
YYVSCWTGDKALRELQEANVSQQCFPILLECAVKAFKAATDTESDIPHLSGMAVVILEGL
FSSLTYFFSRNGCHMVDFQLALQRYVKRDAGASGDWTHTLSLWCLNPAVVFKDIADLSLS
VILTSGTLSPLNSFSSELGLQFGTTLEAPHVIDVESQVWPAVISTGPGNLPLNASYKTAD
EYAFQDALGKSLEEIFKIVPGGCLVFFPSYKLMGKLCKRWHGTGQWSQLNEKKNLFVEPR
GGDQEEFDAVLKGYYDSICKGNKPVFGAKKSANKIAKKSHFAAFKCPRKSNIDGAAFLAV
CRGKVSEGIDFSDDNARAVIIVGIPFPNINDIQVVLKKKYNDTHKSSKSLLSGNEWYCQQ
AFRALNQAAGRCIRHRFDYGAVILLDERYHKERNTAYVSKWLKKSIRHYNNFDTSMEELK
SFFSDVKERVSKNMVNVSQRFEAKEEIIHSMGQNEGITKVKYQKLKKFDCCKRPENSEMK
HDGQLASQGCMEAQQFVRMDVDADHSKEIIDLDCCPQKNLGYPKPSLSMAFSDADPDISI
VKEIPNMDGIGSVYSPGSLNKDENSGLTSITIEASSHEMSFQSIALTNSSRASPNAQCSL
VATPKKNVTLKMHSSILETESSLNLSVNSHTQKRRKSMYSPLVNFVNGQSDTPDSETPDS
TSSVNYSMASRDANRKIEFSVETNGSEHKSKSNVPHVLTTNICVASSTSAGCVMDKRLQI
SCSLCKTPLGLPENQLHLTCSLSSSSKCHLESLGTNVLKFHTGNTSSSGIPVIITDSASV
DQRLLNSEGATGQGIWCEEDGCVFSTIFCPFCSSHNNCLGVRVMAANRSNVHLLNKILFY
LDQLHIQNLKASSDSAPEDKDLLPAVDSSRDKASILNSFDRFSYSPQEQNMGGWRTTKSK
LKLPKRRLLPEAED
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggtgtctgcaactcccggaagaaaccctaaccctaccactaaaacctccaaaaatggg
taccaaattggaggcgtccaggtggagttcccgtaccacccgtacggtgcccagctggca
ttcatgagcagggtcatctccactctcgatcgagctcacagagacggtcattgccacgca
ttgctcgagtctccgaccggaaccggaaaatcgctttctcttctctgctccactctcgct
tggcaacaggcttataagtccaagaatcagttcgccaatctcttgcattccaagcccgat
cccaaggccatgaccgatccggcggctcacggcggcggatttgttcccgaagaggaacct
tcaagtgttcagttatcggagaaggcaaagacaaagcaatccttggcaaacaataaggat
gaaaagaaaaaggcaacacctaccatatactacgcatcgaggacacactcacaaatttct
caagtgatacgtgagtatcggaaaacttcctaccgggtgcctatggcagtgctggcctca
aggaagcattactgcacaaatgcacaagtacatgggaaagagaatattgacgaagaatgt
aagctgcttttgaagaaccgagaggttggatgcttagaatttaaaaatgtaaacaaagtc
aaaggccatccatcacttcagaaaggaggctgccatgaggcccatgatattgaagatctt
gtaaaagttggaaaatctgtgaaaggttgttcatattatgcagcacgatctttgtcagat
gatgcagaattggttttttgcccatataactacatcattaatccagtaattcggggagca
atggaagtagatattaagggatccattgttgttctcgatgaagcccacaatatggaagac
gttgctcgtgatgctggtagtgttgatattgaagaagacattttgcacaaattgcagata
gaactagagcagctttgcccagttgacgttttggtataccaacctctatacgaaacaata
cagggcctcataagttggattgagcaaaggaaaaataagttggagaagcgtgaatttcag
tactatgtctcttgttggactggcgataaggctttgagagagctccaagaagctaatgta
tcacagcagtgcttcccaatcttacttgaatgtgctgtgaaggcattcaaagctgctaca
gatacagaatcagatataccacatttaagtggcatggctgttgtgatattggaaggattg
ttctcttcgcttacttactttttctcaagaaatgggtgtcatatggttgattttcagctt
gctttacaacgatatgttaaaagagatgctggagcttctggcgattggacgcatacctta
agtttgtggtgtttgaatcctgctgttgtgtttaaagatattgctgatctttccttgtca
gtcattttaacatcagggactctgtcacctttgaattccttttcatctgagcttggtctt
cagtttggaacaactctggaagctccacatgttattgatgttgaatcacaagtttggccc
gctgttatttctactggcccaggtaacttaccattgaatgcaagttataagacagcagat
gaatatgccttccaggatgcactcggaaaatccttggaagaaattttcaagattgttcca
ggtgggtgtcttgtgttcttcccaagttataagctgatgggaaaactatgcaagcgttgg
catggaacaggacaatggtctcagttaaatgaaaaaaagaacctttttgttgagccaaga
ggaggagaccaggaggaatttgatgctgttttgaagggttattatgattcaatttgtaag
ggtaataaaccagtttttggggcaaagaaaagtgccaacaagatagcaaaaaaaagtcac
ttcgctgcgttcaagtgtccacgaaagagtaacattgatggagctgcttttcttgctgtg
tgccgaggaaaggtttcagaaggaattgatttttcagatgacaatgctcgggcagtgata
attgtcgggattccgtttcccaacataaatgatattcaagttgtcttaaagaagaagtat
aatgatacacataagtcatccaaaagccttttgagtgggaacgagtggtattgccagcaa
gcctttcgagctctaaatcaagctgcaggacgttgcattcgccataggtttgattatgga
gctgtcatcttattagatgaacgctatcacaaggaaagaaatacagcatatgtgtcaaag
tggctaaagaaatccatcagacattataacaactttgatacgtcaatggaggaattaaaa
tcctttttcagtgatgtcaaggaaagagtaagcaagaatatggttaatgtttcacagagg
tttgaagctaaagaggaaattattcactctatgggtcaaaatgaaggaattacaaaagtg
aaatatcagaaattaaagaagttcgattgttgcaaacgaccagagaattctgaaatgaag
catgatggccaactggcatctcaaggttgtatggaagctcagcaatttgtgcgaatggat
gtggatgctgaccatagcaaggaaataattgatctagattgttgtcctcagaaaaattta
gggtacccaaagccatctttgtccatggcattctctgatgcagatccagacatctccatt
gtcaaagaaatccctaatatggatggaattggttccgtatacagtccaggatccttaaat
aaggatgagaattctggtttaacttcaatcacaattgaggcttcttctcatgaaatgtca
tttcaatcaatagccttgaccaatagtagcagagcttctccaaatgcccagtgcagcctt
gtagcaactcctaaaaagaatgtgactttgaagatgcacagctcgatactagaaacagaa
tcatctttgaatttgagtgttaattctcatacccaaaagaggagaaagtcaatgtattca
ccactggtcaacttcgttaatggacagtctgatactcctgattctgaaactccagattct
actagttctgtaaattactcaatggctagcagagatgcgaatcgcaaaattgaatttagt
gttgagactaatggttcagaacacaaatctaagtccaatgttcctcatgttctcacgact
aatatttgtgttgcttcatccacgtcagctggttgtgtaatggataaaagactacaaatt
tcttgctcactctgcaaaaccccgttgggacttcctgagaatcagctacatctaacatgc
tctttgtcttcttcgtcgaaatgtcatttagaatctcttggtacgaatgtattaaagttt
cacacaggaaatacatcctcatcaggaatacctgttattataactgacagtgcatcagtt
gatcagaggctcttgaattctgaaggtgctactggacagggcatatggtgtgaagaggat
ggatgtgttttcagtaccatcttctgccccttctgcagtagccacaacaattgccttggt
gtacgtgtcatggcagctaacaggtcaaatgttcatttactcaacaagatactgttttac
ttagatcagttgcatattcaaaatcttaaagcatctagtgatagcgctccagaagacaag
gatctcttgcctgcagttgattcaagtagggataaagcctccattctaaattcctttgat
agattctcatactcgccgcaagagcagaacatgggaggctggaggactacaaaatcaaag
cttaaactacccaaaagacgcctacttcctgaagcagaggactaa

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