Malus domestica (apple): 114822455
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Entry
114822455 CDS
T03194
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114822455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
114822455
03009 Ribosome biogenesis [BR:
mdm03009
]
114822455
Enzymes [BR:
mdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114822455
Spliceosome [BR:
mdm03041
]
Complex A
U1 snRNP components
U1 related factors
114822455
Complex B
114822455
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Pre-60S particles
Helicases
114822455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DUF7064
NOA36
Motif
Other DBs
NCBI-GeneID:
114822455
NCBI-ProteinID:
XP_028952643
LinkDB
All DBs
Position
17:complement(join(17435672..17435763,17435879..17436119,17436242..17436334,17436533..17436579,17437366..17437593,17437921..17438104))
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AA seq
294 aa
AA seq
DB search
MDTKKGCESGDQIALQLCTDGQHAVLVHENESQEERVRIVSEFQAGKIPIMIATDVAARD
LDLKDVKYVINYDFPGSLDDYVYHIDCFGSAAAKGTAYTFFTTANAGCAKGLTILLKKAG
QNVSSELEQLGRDVTYPGTYIPRTWRSEANNKMIGYGHFSPMYLPYPNTEKHARYALEEI
RKIKGLQAHFVRLVEAYEFSTLCFFVSMTYLTFEAADPATYEKKLYRAIVVKASGKKDLM
LFGMVNYDGRLTKMHDIREGVEYPKDDEDDEDNEDDNEDDDEDDNEDDDEDGNE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaagaaaggatgtgaatcaggtgatcagatcgccctgcagctttgcacggac
ggtcagcacgcagtcttggttcatgaaaacgaaagtcaagaggaaagggtccggattgtc
tctgagtttcaagctggcaagatccccataatgattgcaacagatgttgccgctcgtgat
ctagatctgaaggatgtgaaatatgttatcaattacgactttccgggatcccttgatgat
tatgtttaccacattgactgctttggaagtgctgcagcaaaaggaacagcatacacattc
tttacaactgctaatgctggatgcgcaaagggacttaccatcttactcaagaaagctgga
cagaatgttagttctgaattggaacaactggggcgtgatgtaacatatccaggaacctac
atacctcggacgtggcgctcggaggctaacaacaaaatgattggatatggtcatttctct
cctatgtatctaccttaccccaatactgaaaaacatgcacgttacgccctggaggaaatc
aggaaaataaaggggctccaagcgcattttgtgagattggtggaggcatacgaattctct
accttgtgtttttttgttagtatgacttatcttacttttgaggccgctgaccccgcaact
tacgaaaagaagctttaccgagcaatagttgttaaggcgagtggcaaaaaggatttgatg
ttgtttggtatggtcaattatgatgggcgtttgacaaaaatgcatgacatcagagaggga
gtcgaatatccaaaagacgatgaggacgatgaagacaatgaagacgacaatgaagatgac
gatgaagacgacaatgaagatgacgatgaagacggcaatgaatga
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integrated database retrieval system
