Malus domestica (apple): 114824043
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Entry
114824043 CDS
T03194
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
114824043
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114824043
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114824043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf_RING_Vps8
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf_RING_Vps8_fungal
zinc_ribbon_16
zf-RING_Vps41
PHD_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
114824043
NCBI-ProteinID:
XP_028956085
LinkDB
All DBs
Position
03:join(31437465..31438311,31438710..31439104,31439295..31439387,31439602..31439769,31439882..31440028)
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AA seq
549 aa
AA seq
DB search
MGQRNMLCPSQMIDLEMSQQGEDYLCPPPSVHFGGASSIQQHNVHTMVTASGSTTSLDAQ
HLPERYDNATFYRMTQYSVQHHQHNVDLGVATPANYYYSYMTPSSSTGVLPVPLSHGASD
PSPSSSHYGVLGISADEYNRNSHIMDDPRGLYKRKNPEGLPGNFQYFNASATPSSSVPPL
NMRNPDGVAVMDAVNYALPQYAGTGNPPIMEAGPQSSMRNRSATTGLDSVMTHDHNHLNQ
ANYAGQRFQPAGTLWLDQHLSGNSGDGSSSSWNQVPTIPFMHGGNVTVGSMDSGNMGMQR
YHDSSSNRSSSILRHPPPLNHRHHNQHVAPPMQGLRGHNLNFNAQGATAASYRLPASSSR
STMNPSQNGLEIGRRQPGSIPSNGFRIYRPHQGVIPEAALRHQNLPHFRVLQADEGVIVD
VPNFYGSFMDQHRDMRLDIEDMSYEELLALGEQIGHVSTGLSEDTIRKQLKSRSYLSSSI
NLNLEDAGSPEKEADSCIICQDNYKNREKIGILRCGHEYHASCLKKWLLVKNVCPICKSE
ALNTGKKNV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaagaaatatgctatgccctagtcagatgattgatttggaaatgagtcaacaa
ggggaagattatctctgccccccaccctccgtccattttgggggtgcttctagtatccaa
cagcacaatgttcacacaatggtaacagcttcagggagcactactagtttggatgcccaa
catttaccggagcgttatgataatgccacattctacaggatgacccagtacagtgttcag
catcatcaacataatgttgatttgggtgttgcaactccagccaactattactattcatac
atgaccccttcatctagtactggggtgttacctgttcctctaagtcacggggcttctgat
ccttcaccatcttctagccattatggagtccttggaatttctgcagatgagtataataga
aatagtcacataatggatgatcctagaggtctgtacaagagaaaaaaccctgaaggccta
ccagggaattttcaatattttaatgcctctgcaacccctagttcttcagtgcctcctttg
aatatgaggaatcctgatggagttgctgtaatggatgctgtaaattatgccttgcctcag
tatgcaggaactgggaatccaccaattatggaagcaggacctcagagtagtatgaggaac
agatcagctacaactgggcttgattctgttatgacacatgaccataaccatctgaatcaa
gcaaattatgcaggtcagcggtttcagccagctggaactctctggttagaccaacattta
agtggtaacagtggagatggaagctcttcatcctggaatcaagttcctactattcctttt
atgcacgggggtaatgtcacagtaggttctatggacagcgggaacatgggtatgcaaaga
tatcatgattcatctagcaacagaagttcctctattctccggcatcctcctccgctcaac
caccgccatcataatcagcacgtagcaccacccatgcaaggattaagaggccacaacctt
aattttaacgcccagggtgccacagcagcttcatatagattacctgcaagttcctcgcgc
agcaccatgaatccttctcagaatggtttggagattggtcgtaggcaaccaggatctatt
ccctcgaatggctttaggatatacaggccacaccaaggagttattcccgaggcagcttta
agacaccagaaccttccccacttcagagttcttcaggctgatgaaggtgtcatagtagat
gttccaaacttttatggcagctttatggaccagcacagagatatgcggttggacatagag
gatatgtcatatgaggagcttcttgcattgggggagcagattggccatgtaagcactggg
ttgtcagaggataccattagaaaacaactaaagtcaaggtcttatttatcatcttccatt
aatttaaacctcgaagatgctggatccccagagaaggaagccgattcctgcattatatgc
caggataattataagaaccgcgagaagataggaattctccgctgcggacacgagtaccat
gcaagttgcttgaagaagtggttgcttgtgaaaaatgtctgccccatctgcaaatccgaa
gcgttgaacacagggaagaagaatgtatag
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integrated database retrieval system
