Malus domestica (apple): 114824349
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Entry
114824349 CDS
T03194
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
114824349
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
114824349
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
TPR_GEMI5
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
114824349
NCBI-ProteinID:
XP_028956841
LinkDB
All DBs
Position
01:complement(join(23670471..23670786,23670887..23670985,23671386..23674428,23674716..23675052,23675171..23675329))
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AA seq
1317 aa
AA seq
DB search
MNNLKLYSEVSLNLHLQSEEELILFSAFDIEQNRLFFASSDNNIYATHLSSIQNERAWSK
TSISAQVNQIELDPKDFITSFSYLMEKEALLVGTGNGLLLLHSVGVNATQVVGGVDGGVK
CIAPSPDGDLLAITTGSGQVLVMTQDWDLLYETALEDLPEDGNHVCEQQLSSKFTFESPI
SWRGDGKYFVTLSEVQDLASMLKRLKIWERHSGAVHAVSESKSFIGSVVDWMPSGAKIAA
VYDRKSENECPSIVFFERNGLERNLFSINEQTNATIEFLKWNCSSDLLAAVVRCENYDCV
KVWYFSNNHWYLKSEIRYPRQDGVRFVWNPTKSLQLLCWTLGGQITSYDFIWNSAVMDDS
TALVIDDSKILVTPLSLYIMPPPMYLFSLKFLSAVRDFAFYSKNSRNCLAAFLSDGSLCV
VELPATDTWEELEGKEFAAEASISESPFGSFLHMTWLDPHKILAVSHYGFSHSNYLSQTT
SSEDGAGFYLQEVELVCSENHVPGLVTCSGWHAKVAGQNSLEEMIISIAPNPARKGSAFV
QFDGGKVCEYVPKFGIPRGVPKHDWSFSSTCPSMSVVLVGNSGSLEPLIFGLDESCRLHV
NGKIICNNCSSFSLYSNLDDQVITHIVLATKQDCLFIADITDIFHRELEIKYEKPIQAGN
KKREDHGDFINIWERGAKVVGVLHGDEAAVILQTTRGNLESMYPRKLVLASICNALVQRH
FRDALLMVRRHRIDFNVIVDYCGWQVFLQSASEFVKQVNNLNYITEFVCAINNENIIETL
YKKFISLPFPKEAKDDSKGFDSNNKIPSVLLAIRKALEEHSPEVPARELCILTTLARSDP
PALDEALERIKAIREMELSGSNDQRRMSYPSAEEALKHLLWLSDSESVYEAALGLYDLNL
AAMVALNSQRDPKEFLPFLQQLESMPVTLMRYNIDLRLHRFEKALKHIVSAGDACYSDSL
NLMRKNPQLFPLGHQLIANPAKKKQVLEAWGDYLSGEKCFDDAAATYLCCSSLEKALKSY
RACGNWSKVLTVAGLLKLSEDEIMQMAHELCEELQALGKPREAAKIALEYCGDVNNGMNL
LISARDWEEALRVALMHNRQDLVSDVKNASLECASLLIGEYEEGLEKVGKYLARYLALRQ
RRLLLAAKIKSEEWSMDDLDDDTASEASSNFSGMSAYTTGTRGSSGTSTRSRAASKARDA
RRQRKRGKIRPGSPGEELALADHLKGMSLTTGALQELKSLLLSLMMLGEVEIARKLQRAG
ENLQLSHMAAVKLTEDTISSDNTDEHTQTLDHYTQIIRSEVQNSEAFFWRCKVFLSP
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgaagctctactcggaggtctctctgaatctccacttacaatccgaggag
gagctcatactcttctccgctttcgacatcgagcagaatcgcttgttcttcgcttcctcc
gacaataacatttacgccactcacctctcgtccatccagaatgaaagggcgtggagcaaa
acctcgatatcggcgcaagttaatcaaatcgaattggatcccaaggacttcatcacttca
tttagttacctcatggagaaagaggcgcttttggtgggaactggcaatgggcttctgctg
ctgcattctgtgggtgttaatgctacccaagtcgttggtggtgtggatggcggtgtcaag
tgcattgcccccagtccggatggtgaccttcttgccataactactgggtctgggcaggtg
ctggtgatgactcaggattgggatttgttgtacgagactgcgcttgaggatctaccggaa
gatggcaaccacgtatgtgaacagcaattatcttctaagttcacatttgaaagccctatt
tcttggcgtggtgatgggaagtactttgtcaccctaagtgaggtgcaggatttggcatcc
atgcttaagaggcttaaaatttgggagcgacattcgggagcagtacatgctgtatctgaa
tcaaagtcgttcattggatcagttgtggactggatgcccagtggagcaaaaattgcagct
gtttatgataggaaatcggaaaatgagtgcccctcaatagttttctttgagaggaatggg
ttagaaagaaacttgtttagcatcaatgagcaaacaaatgcaaccatagaatttctcaag
tggaattgcagctcagatctgcttgctgccgttgtccgatgtgaaaactatgactgcgtc
aaggtttggtatttcagtaacaaccactggtacttgaaatctgaaattagatacccaaga
caggatggagtgaggtttgtctggaatccaacgaagtcactgcagttgttatgttggact
cttggtggccagattacatcgtacgacttcatatggaattcagctgtgatggatgactct
actgcgctagtaattgatgactccaagatacttgtaacgcctctttctttatacataatg
ccacctccgatgtacttattcagccttaaattcctgagtgctgtccgggactttgctttc
tattccaagaattctaggaactgtttggctgcttttctgtcagatggttctttatgtgtc
gttgagcttcctgccactgatacttgggaagaattagaaggcaaagaatttgctgctgaa
gcatccatttctgaatcaccatttggttcatttttgcatatgacatggttggacccgcat
aaaattcttgctgtttctcactacgggttcagtcatagtaattacttatctcaaactaca
tcaagtgaggatggcgccggcttttatttgcaggaagttgagcttgtatgttctgagaat
catgtccctggtttagtgacatgctcaggctggcatgcaaaagttgctggccaaaactct
ctagaagagatgattatttcaattgctcctaatcctgctagaaaaggttcggcatttgtc
caatttgatggtggaaaggtttgcgagtatgtcccaaagttcggtattcctagaggagtt
ccaaaacatgattggagtttctcatcaacttgcccttctatgagtgtggttctagttgga
aacagtgggtcattggaacctttaatttttggacttgatgagagctgtaggctgcacgtc
aatgggaagataatatgcaacaactgcagcagtttctctctgtactcaaatttggatgac
caagtgatcacgcatatagttttggcaactaagcaggattgcctttttattgctgacatc
acagatatatttcatagagagttggaaataaaatatgagaaacccatccaagctggtaac
aagaaacgagaagatcatggagacttcataaacatatgggaaagaggtgcaaaagttgtt
ggagtcctgcatggagacgaagctgctgttattttgcaaacaactcgggggaacctagaa
tccatgtatccaagaaaattggtcctggcctctatttgcaatgcattggtacagaggcac
ttcagagacgcacttctcatggtgaggcggcataggatagatttcaatgtcattgttgac
tattgtggttggcaagtgtttctccaatcagcttcagaatttgtcaagcaggttaataac
ttgaactacataactgagtttgtttgtgccataaacaacgaaaacattatagagacactg
tataaaaaatttatttctctacccttcccgaaagaagctaaagatgactccaagggtttt
gattcgaataacaagataccttctgtgcttctggccataaggaaggctcttgaggaacat
tcaccagaagttcctgcaagggagctttgcattttaaccactctagctcgtagtgacccc
cctgcacttgatgaggctttggagagaataaaagctatccgtgaaatggaattgtcaggt
tccaatgaccaaaggagaatgtcgtacccctctgctgaagaggctttgaagcatctcctg
tggttatctgattctgagtctgtgtatgaggctgctttaggcctttacgatttgaacctt
gcagctatggtggcattgaactctcagcgggaccctaaagagttccttccttttcttcaa
caattggaatcgatgccagttactttaatgcgttataacattgaccttaggctgcacagg
tttgagaaagcgctcaagcacattgtttctgcaggagacgcttgttactcagattctctg
aatctgatgaggaaaaatcctcaacttttccccttgggacatcaattgattgctaatcct
gccaagaagaagcaagtccttgaggcctggggagattatcttagtggtgaaaaatgcttc
gatgatgctgctgccacttatttgtgttgttccagtttggagaaggctttgaagtcatac
cgtgcttgtggtaattggagtaaggtgcttacagttgctgggcttctaaaactgagtgaa
gatgagatcatgcaaatggctcatgagctttgtgaagaacttcaagcacttggtaaacca
agggaagcagccaaaattgctctggagtattgtggtgacgttaacaatgggatgaatttg
ttgattagcgccagggattgggaggaggctttgagagtcgctttaatgcacaatagacag
gatttggtctctgatgtgaagaatgcatccttggaatgtgcaagcttgctcattggtgaa
tacgaggaaggtttggagaaagtagggaagtacttggctcgatacttggctttaagacaa
agaaggttacttcttgcagcaaaaatcaagtcagaggaatggtcaatggacgatcttgac
gatgatactgcttcagaagctagcagtaatttcagtggaatgagtgcttacaccacgggg
accaggggtagctctggtacttccacccgatcaagggcagccagcaaggcaagagatgcc
aggcgccagagaaaaagaggaaaaatccgccccggcagtcctggcgaggaactggctctg
gcagaccacttgaagggaatgtctctaacgactggagctttgcaagagctaaagtctttg
ttactttcgcttatgatgcttggcgaggttgaaatcgcaaggaagctgcaaagggctggg
gaaaaccttcaactgtctcatatggcagcagtcaaactaactgaagatacaatatccagt
gataacacagatgagcatacgcagactttggatcattacacacaaattatccgaagtgaa
gtgcagaactccgaggctttcttttggcgatgtaaagtatttctttccccttaa
DBGET
integrated database retrieval system
