Malus domestica (apple): 114824433
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Entry
114824433 CDS
T03194
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
mdm
Malus domestica (apple)
Pathway
mdm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
114824433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
114824433
Membrane trafficking [BR:
mdm04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
114824433
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
GCP_C_terminal
Syntaxin_2
Prominin
EF-G-binding_N
MCPsignal
Motif
Other DBs
NCBI-GeneID:
114824433
NCBI-ProteinID:
XP_028957257
LinkDB
All DBs
Position
04:complement(join(27948841..27948948,27949059..27949139,27949216..27949281,27949374..27949451,27949625..27949702,27949971..27950060,27950228..27950504,27951227..27951420))
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AA seq
323 aa
AA seq
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MATRNRTLVYRKYRDALKSVRAPTSSSASSSGAGGGPVIELVSTSLLNPNRNYAPLSTED
PGNSSRGALTVGLPPAWVDLSEEVAANVQRARVKMAELTKAHAKALMPSFGDGKEDQRLI
ESLTQEITNLIRKSEKRLQRLSAAGPSEDSNVRKNVQRSLATDLQTLSMDLRKKQSTYLK
RLRQQTEGQDGDDLEMNLNGSTSRMDGDDLDDMMFNERQMAKIKKNEAFTAEREREIQQV
VESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVASTVDEGLKQLQKAERTQKQGGMVM
CATVLVIMCFVMLVLLILKEIFF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcggaccttggtttacagaaagtatagggatgcgttgaagagcgtc
cgcgctcccacgagctcctccgcttcgagctccggcgccggtggcggcccggtcattgaa
ttggtcagcacttcgcttttgaatcccaatcggaattatgctccgctcagtactgaagat
cccggtaattcaagtcggggtgcacttactgttggtctaccgccagcatgggtggatctt
tcggaagaggtagcagcaaacgtgcagcgtgcacgggtaaaaatggctgagctgactaag
gctcatgcaaaagctttaatgccttcttttggagacggtaaagaagatcaacgtttgatt
gagagtcttacgcaagagataactaatttgataaggaaatccgagaagagactacagagg
ctttctgcagctgggccttctgaagattcaaatgttagaaaaaatgtgcagcgctctctt
gccactgaccttcagaccctgtcaatggaccttcgcaagaaacaatcaacttatttgaag
cgactcaggcagcaaacagagggtcaagatggggatgatttagagatgaacctaaatgga
agtacatcgagaatggacggtgatgatttggatgacatgatgtttaatgagcgtcagatg
gccaagataaagaaaaacgaggcattcacagcagaaagggaaagagagatccaacaggtt
gtggagtctgtgaatgagcttgctcagattatgaaggatttgtcagtactagtgatagac
cagggaactattgttgataggatagactacaacattcagaatgtagcaagtacagtcgat
gagggcctcaagcaattgcaaaaggctgagagaacacagaaacaaggggggatggtgatg
tgtgctaccgtactcgttatcatgtgctttgtcatgttggtcctcctaatcctcaaggag
atattcttttga
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integrated database retrieval system
