KEGG   Malus domestica (apple): 114824789
Entry
114824789         CDS       T03194                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mdm  Malus domestica (apple)
Pathway
mdm03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114824789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    114824789
   03036 Chromosome and associated proteins [BR:mdm03036]
    114824789
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     114824789
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    114824789
   PBAF complex
    114824789
   GBAF(ncBAF) complex
    114824789
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding ZZ Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 114824789
NCBI-ProteinID: XP_028957874
LinkDB
Position
05:complement(join(12826719..12827090,12827176..12827366,12827578..12828239,12828317..12828480,12829168..12829827,12830362..12830888,12831247..12831682))
AA seq 1003 aa
MEEKRRDAAGTQPPSNADSPTAEPSSTRRRGGAQKRKASSLGGSTSSSTPSKRFAREKAL
LSHTSIHNGPLTRARQGPSSLASASSAGAAAKPAVQAKRPDPVGEAVAELVKREIDLEAL
EASMEAGFESIRSRSANAHVVPSHCGWFSWTKVHSIEEQMLPSFFNGKSVTRTPDVYLEI
RNCIMKKFNANPGTFIELKDLLELEVGEFDARQEIMEFLDHWGLINFHPFPPTGSSVASI
DGDGVVEKDSLVDKLYHFEALQSRSSVVPKTNITTPTVLSGLFPDSAIAEELVRPEGPAV
EYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSSDFILMEPAEVPSVSGGN
WTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDYDDGFDGSAK
ETACPTSTGNDLSAPKGASEATENKTAVSASDPQTFPIETSKEVTEVNIGQDTSKPEDLN
EVKDGQETSKLEDTSELKVDQETDENFALKALKEAFEVVGYSPTPEGQLSFTKVGNPAMA
LAAFLARLVGPDAAIASAHNSLKYISASCGIALAARHCFILEDPPNGSKEHAGPDSVSAE
VEAQKDKVNEDKSQKEDNSTSGLEDKDSSNNSSDKKLEKSSSEEKSQSAKEQDGVVSDEE
VGTENLKNSDKLEFPRVESPTTVEDTTDSKVETGHQTSSEKESGRAGKPSEPTEPVTDVD
MSDSAPPTKNEIQQPITSNSVEEPPQSKEATKDVDVSNSLATEINGPQPVVTAKSEEPPE
PTEVPKDVDMVCDSQTPQKDEPQQPVTSNSVVEKEASDDQTKDGKIEKHDSMETKVGEKI
DKLKLAAVSAVSAAAVKAKLLAEQEEDQTRQLAAMLVEKQLHKLDAKLGFFNEMEHVVMR
VREQLDRSRQKLYHERAQIIASRLGVPGSSRGMPSSIPANRMAMNIANSVPRPTLGMTSQ
RPPMSRPMGAAAPTPSNQFSATTLAGSSIWPPRKDKLSSVGSK
NT seq 3012 nt   +upstreamnt  +downstreamnt
atggaagaaaaacgccgcgacgctgccggaactcagccgccgtcaaatgccgactctcca
accgccgagccgtcttctactcggcgtcgtggcggagcccaaaagcgaaaggcaagcagc
ctcggcggctcaacctcttcatcgacgccatccaaacgtttcgctcgcgagaaggctttg
ctttctcacacttcgatccacaacggcccgttgacccgggcccgtcagggccctagcagc
ctcgcttcggcttcatcagctggggctgctgcgaagccggcggtgcaagccaagcggcct
gacccggtgggggaggcggtggctgagctggtgaaacgggagatcgatttggaggctctg
gaggcttctatggaggctgggtttgaatccattagatctcgcagtgccaatgctcatgtt
gttcctagtcattgcggttggttttcttggacaaaggttcactccattgaggagcaaatg
ttgccgtctttctttaatgggaagtctgtgactcggactcctgacgtatacttagagata
cgtaattgcatcatgaagaaattcaacgcaaatccgggcacatttattgaattaaaggac
ttgttggagcttgaagttggagaatttgatgctagacaagaaataatggaatttttggac
cattggggtttgattaatttccacccattcccaccaacaggttcttctgtggccagcatc
gacggtgatggagtggttgaaaaggattctttggttgataagttgtatcactttgaagca
ttacaatcacgctcatcagttgttcccaagactaatataacgaccccaacagtgctatct
gggttgtttcccgattctgcaattgctgaagagttggttaggcctgaagggccagctgtt
gagtaccattgcaactcttgttcagctgattgctcacgcaagcgctaccattgccagaag
caggcagattttgatctatgcactgattgctttaataatgggaaattcgactctggcatg
tcttcgtcagatttcattcttatggagcctgctgaagttccaagtgtaagtggtgggaac
tggactgatcaggagactctccttctccttgaagcattagaactttataaagaaaactgg
aatgagattgctgaacatgttgcaacaaaaacaaaagctcaatgtatactgcactttgtt
caaatgccaattgaggacacttttcttgattatgacgatggttttgatggtagtgccaaa
gagactgcatgtccaacttcaaccggaaatgatttatcggcccccaaaggtgcctctgaa
gcaacagagaataagactgctgttagtgcgagtgacccccaaactttcccgattgaaact
tcaaaagaagtgactgaagtaaacattggacaggatacttcaaagccagaagatttaaat
gaagtcaaagacggtcaggaaacttcaaaattggaagataccagtgaattgaaagttgat
caagaaacagatgagaattttgcactaaaggctcttaaagaagcattcgaagttgttggt
tattctccaacacctgaaggtcaactttcatttacaaaagtgggaaaccctgccatggca
ttggcagcattcctagcacgtttggtgggacctgatgctgctattgcttcagcacataat
tctttgaaatatatatctgccagttgtggtattgcgctggctgcaaggcattgctttatt
ttggaagatccaccgaatggcagtaaggaacatgctggtcctgatagtgtttctgctgaa
gtggaagcacagaaagacaaagtcaatgaagacaaaagccagaaagaggataactccacc
tcaggtttggaagataaagattcatcaaataatagcagtgacaagaaacttgaaaaatct
tcttctgaagaaaagtcgcaatctgcaaaagaacaagatggcgtagtttctgatgaggaa
gtaggaactgaaaatttgaagaactcagacaagttagagtttccaagggttgaatcacca
actactgtggaggacacaaccgattcaaaagtggagacagggcatcaaacaagttctgag
aaggaatcaggacgagcaggaaagccttctgaacctacagagccagtaactgatgtggat
atgtctgattcagctccccctacaaaaaatgagattcaacagccaattacgtcgaattca
gtagaggaacctcctcaatctaaagaggcaacaaaagatgtagatgtatctaattctctg
gctacagaaataaatggacctcaaccagtggttactgccaaatcagaagaaccgcctgaa
cctacagaggtaccaaaggatgtggatatggtgtgtgattctcagaccccacaaaaggat
gagcctcagcaaccagttacatcaaattcagtggttgaaaaggaagcaagtgacgatcaa
actaaagatggtaaaatagaaaaacatgacagtatggagacaaaggtgggtgagaaaatt
gataaactaaagcttgctgcagtttctgcagtgtcagcggctgcagtgaaggcaaagctt
ctagcagaacaggaagaagatcaaacccgacaacttgcagcaatgttggtggagaagcag
ttgcataagttggacgccaaattaggattctttaacgagatggaacatgttgtaatgagg
gtaagagagcaattggacaggtcaagacagaagctctaccatgagcgggcacagataatt
gcatctcgccttggtgtaccaggttcatctagaggcatgccatcatcaattcctgccaat
agaatggccatgaatattgcaaactcagttccaaggcccacgctaggcatgacttcccaa
aggccacctatgtcaagaccgatgggggcagctgccccgactccgtcaaaccaattttca
gccacaacattggcaggaagttcaatatggcctcccagaaaggacaaactttcatcagtt
gggtccaagtaa

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