Malus domestica (apple): 114824855
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Entry
114824855 CDS
T03194
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
mdm
Malus domestica (apple)
Pathway
mdm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114824855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
114824855
03051 Proteasome [BR:
mdm03051
]
114824855
Membrane trafficking [BR:
mdm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
114824855
Proteasome [BR:
mdm03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114824855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
UBA_7
STI1-HOP_DP
Ubiquitin_2
XPC-binding
Rad60-SLD_2
Dsc3_N
UBA_HOIP
UBA_NBR1_C
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
114824855
NCBI-ProteinID:
XP_028958068
LinkDB
All DBs
Position
05:join(26327379..26327616,26327899..26328675,26329258..26329466,26329558..26329665,26329832..26329887,26330198..26330226,26330323..26330409,26330530..26330678)
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AA seq
550 aa
AA seq
DB search
MGGEGDSSEPKVSGEGGEGGEQINIRCSNGSKFSVRASLDSTVGAFKEVLSQNCDIPADQ
QRLIYKGRILKDDQTLTSYGLQTDHTVHMVRAFAAPASTPAPPAANATSASPTTAPGVTR
GVGSTEREGLQTPDLGASLLFGQGLNPLGGGGGQGLFGAGLPEFEQVQQQLTQNPNMMRD
IMNMPAIQSLMNNPDLMRGLIMNNPQMRDIIDRNPELAHVLNDPGILRQTLEAARNPELM
REMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTGNAGNDLGSNPFSALLGNQG
GAQARDGSNNPSTTGSETPAGSVAPNTNPLPNPWGAAGGGNQPNTTRTNPVGDGRAAGIA
GLGGLGLPGMEQMLGGMPDANAMNQLLQNPAISQMMQSMLSNPQYMNQILNPQLRGMVDS
NPQFREMMQNPELLRQLTNPETMQQMLALQQSLFSGNRQQPTQDPTLTGGATGAPNNAGL
EMLMNMFGGLGAGSLAAANPNVPPEELYENQLRQLQEMGFFDTQENIRALQATSGNVHAA
VERLLGNPGA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggagggcgattccagcgagcctaaagtcagtggcgaaggaggagaaggagga
gagcagattaacattcgatgctcgaatggttccaagttttcagtgagggcgagcctggac
tcgactgttggggcattcaaggaagttttgtctcagaattgcgatattccagctgatcag
cagaggttgatttacaaaggtcgtattttgaaggacgaccagaccctcactagttatggt
ctgcagacagatcatactgttcacatggtccgtgcctttgctgcacctgcatcaaccccc
gctcctcctgctgctaatgctacttctgctagtcctacaactgctccaggtgttactcgc
ggtgttggttccactgagcgtgaggggcttcagactcctgaccttggggcatctttgttg
tttgggcagggtttaaacccactcggtggtggtggaggacaggggttatttggagctggt
cttccggaatttgaacaagtgcagcagcaactgactcagaacccgaacatgatgagggac
ataatgaacatgcctgccattcagagtttgatgaataaccctgatttgatgcgtggcttg
attatgaacaatccgcaaatgcgtgatatcattgaccggaacccagagcttgcacatgta
cttaatgatcctggcattctccgacagacattggaagctgcaaggaaccctgaactcatg
cgtgagatgatgcgaaacactgacagggcaatgagtaacattgaatcttcccctgaggga
ttcaacatgctgaggcggatgtatgaaaacgttcaggagccatttttgaatgctacaacc
gggaatgctggaaatgatttgggttcaaatccattttctgctcttttgggcaaccagggt
ggggcacaggcccgggatgggtctaacaacccttcaaccactggctcagaaacacctgca
ggttctgttgctcctaatacaaacccacttcctaacccttggggcgctgctggtggagga
aatcagccaaatactaccaggacaaatcctgttggggatggaagggcagccggtattgct
ggcctgggaggtcttggtctccccggaatggaacagatgcttggtggcatgccagatgct
aatgcaatgaatcagcttttgcagaatccagcgatatcacaaatgatgcaaagcatgctt
tccaatccccagtacatgaatcagattctgaatccacaactacgcggaatggttgattca
aatcctcaatttagagaaatgatgcaaaatccagagctactgcggcagttaacaaaccct
gaaacaatgcagcaaatgctcgcgttacagcagtcgctattttcaggcaatcgacagcaa
ccaactcaggatccaactctcactggtggtgctacaggtgcacccaataatgctgggttg
gagatgctgatgaacatgtttggaggtcttggagctggcagcttggccgcggcaaaccct
aatgtaccaccggaagagctgtatgaaaatcagctaaggcagcttcaagaaatgggtttc
ttcgatacccaagagaatatcagggcattgcaagccacttctgggaacgtccacgctgcg
gtggagcgacttttagggaatcccggggcgtaa
DBGET
integrated database retrieval system
