KEGG   Malus domestica (apple): 114825656
Entry
114825656         CDS       T03194                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
  KO
K12897  transformer-2 protein
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114825656
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    114825656
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    114825656
Protein phosphatases and associated proteins [BR:mdm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     114825656
Spliceosome [BR:mdm03041]
 Common components
  Common spliceosomal components
   SR proteins
    114825656
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 114825656
NCBI-ProteinID: XP_028960520
LinkDB
Position
06:complement(join(20364898..20365100,20365629..20365692,20366428..20366577,20367243..20367354,20367483..20367566,20367678..20367700))
AA seq 211 aa
MPYPRERRSASPHNSPSPVRGRRLRSSSRSRRSRSRSHESVDASNPGNNLYITGLSTRVT
STDLEKFFNKQGKVLDCHLVTDPRTRESRGFGFVTMETVEDAERCIKYLDRSVLEGRLVT
VEKAKRKRGRTPTPGRYQGLRDKRDAGRDRDRDCDRRRSRSYSPRRLQDRDPYPRDRRGR
SRSPYGRRADEHSDSYRRRRERSLSGGRNPR
NT seq 636 nt   +upstreamnt  +downstreamnt
atgccatacccaagagaaagaaggtccgcttcgccacacaactctccttcacccgtcaga
ggccgccggttgagatcatcgtcgaggtctaggagaagtcgttctaggagccatgaatct
gtcgatgcatccaatcctggaaacaacttgtacataacaggcttatccacaagggttacc
tctactgatcttgagaaattttttaataaacaggggaaggtactggactgccatctggtt
acagaccctcgcaccagagaatcccgtggatttggctttgtcacaatggaaactgttgag
gatgcagaacgctgcatcaaatatttggatcggtctgtgcttgaaggtcgattagttaca
gtggaaaaggcaaaaaggaaacgagggaggactccaactccaggaaggtatcaaggtttg
agagataaacgagatgcaggacgtgatcgtgatcgtgattgtgaccgtagacgatctcga
agctattcacctcgtaggttgcaagacagagatccttatcccagggaccgccgaggaaga
tcacgctctccatatggtaggagggcggatgaacactcggactcatacaggaggcgcagg
gaacgctccttgtcagggggcagaaaccctagatag

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