Malus domestica (apple): 114826039
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Entry
114826039 CDS
T03194
Name
(RefSeq) DNA repair protein RAD51 homolog 3-like isoform X1
KO
K10870
RAD51-like protein 2
Organism
mdm
Malus domestica (apple)
Pathway
mdm03440
Homologous recombination
mdm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114826039
03460 Fanconi anemia pathway
114826039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
114826039
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
114826039
FA (Fanconi anemia) pathway
Other FA pathway factors
114826039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
AAA_25
DnaB_C
AAA_24
Motif
Other DBs
NCBI-GeneID:
114826039
NCBI-ProteinID:
XP_028961472
LinkDB
All DBs
Position
07:join(14554865..14554976,14556262..14556360,14557254..14557376,14557562..14557595,14557680..14557750,14557845..14558071,14558331..14558462,14559044..14559110,14559298..14559473)
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AA seq
346 aa
AA seq
DB search
MEVGRLPISASLRGKLISAGYTTFASLSSLSPSDLARDLKIPESEALEILKAASLDCGLD
KLDKSNVIVNGAQTAWELLHEEQSFPRIITSSSDLDNILGGGINCKEVTEIGGLPGIGKT
QMGIQLAVNVQIPVDLGGLGGKAVYVDTEGSFMVERALQIAKASIVEMSNYTELLKKKNR
VCQVDIQPTDILDNIFYFRICTYTEQIALINYLDKFILEHKDVKIVIVDSVTFHFRQDFE
DLALRTRLLGGMALKLMNLAKKYNLAVVIFNQATTKYVEGSFQLSLALGDSWSHCCTNRV
ILHWNGDERNAYLDKSPSLRSASAPFSVTSEGIRNSASNHKRIKLM
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgggaaggttaccaatctcagcatctctgagaggcaaactgatatcagcaggc
tacaccactttcgcttccctctcgtctctctccccctccgaccttgctcgagatctgaaa
attccagagagtgaagctcttgaaatcctgaaggctgcatcactcgattgtgggttggac
aaactagataaaagtaatgttattgtcaatggtgcacaaactgcttgggaattgctccat
gaagagcagtcatttccacgcatcattacttcttcttctgatctagataacatcctcggt
gggggaattaattgcaaagaagttactgaaattggtgggctaccgggaattggtaaaaca
cagatggggattcaacttgccgtgaatgtgcaaattccagttgatttgggtggcctaggt
ggaaaggcagtatatgtcgatacagaaggcagctttatggtggaacgggcgctacaaatt
gctaaagcttccattgtggaaatgtcaaattatactgagcttttgaagaagaaaaatcga
gtttgccaagttgatattcagccgactgatatcttggacaacatattttatttccgcatc
tgcacttatacagagcaaattgccctgataaattacttagacaaattcatcttggagcat
aaagatgttaagattgtgattgttgatagtgttacttttcacttccgccaagattttgag
gacttggctctcaggactcggttacttggtggaatggccttaaagttgatgaaccttgca
aagaaatataatctggcagttgtcatattcaatcaagcaaccacaaagtatgtagaaggt
tcattccaattaagtcttgcactcggggatagctggtcgcattgttgcaccaatcgagtc
atattgcattggaatggtgatgaacgaaatgcgtacctagacaagtcaccttctctccga
tcagcatcagctccattttctgtgaccagtgaaggaattaggaactctgcttcaaaccat
aagcggatcaaattaatgtga
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