Malus domestica (apple): 114826045
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Entry
114826045 CDS
T03194
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
114826045
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114826045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
114826045
NCBI-ProteinID:
XP_028961490
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All DBs
Position
07:join(17623024..17623218,17623626..17623802,17624157..17624327,17624492..17624673,17624760..17625006,17625191..17625326,17625511..17625986,17626132..17626377)
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AA seq
609 aa
AA seq
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MGVGGKFWDLLKPYARNEGFDFLRNKRVAVDLSFWIVQHEAAIKDRARSPHLRLTFFRTI
NLFSKFGAFPVFVLDGTPSPLKSQARIARFFRSSGIDSSSLPVAENGVSAERNSTFTKYI
QECVELLELLGMPVLKAKGEAEALCAQLNGDGHVDACITSDSDAFLFGAKCVIKTFRSNS
KEPFECFYMSDIEAGLGLKRNHLIALSLLAGNDHDLNGVQGIGLDTALLFAQTFSEDEIL
NRLCEIGNGDASLFQGGMKSVDDSVPSFDESSSKTKCSHCSFCGHPGSKRAHFKSSCEFC
SNAVGEGCMKRSEGFKCSCSTCDMDRKEKKLKKYENWRLKVLSKIALEPNFPNDEIIEMY
LCNNHGCFNESDGPSILWESPKTEMLVEFLTYHQRWEPSYIRQRMLPMLSTIFLREMAKN
PVKKLLYGQYEFNSINRLKIRYGHQYYVVKWKKTAPTLCCVSYPIPPEESDIQQDDVMVV
DESFSSLDESDVPTIDMSGGCCFLLTDENMDLVHAAFPEEVGRFLLEKELKEMKRRKATG
GKPETAGSKGVQLNITEFFRSAKKQYETEPGEDLTQNTDSQIAAETGKEKRSPSSSNLPK
SVRRRLLFD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgggggtaaattctgggacttgctaaaaccctacgcccgaaacgagggtttt
gatttcttaaggaacaagcgggttgctgtggacctctccttttggatcgtacagcacgaa
gccgccatcaaggaccgcgcacgaagtccccacctcaggctcaccttcttccgtaccatc
aatctcttctccaagtttggggcatttccggtctttgtgcttgacggaactccatcgcct
ctaaagtctcaggcgaggattgcaaggttctttcgttcttctggtattgattcatcgagt
ttgccagtggctgaaaatggtgtttcagctgagaggaatagcacatttacgaagtatatt
caagaatgtgtggaactacttgaacttcttgggatgcctgttttaaaagcaaaaggagag
gctgaagcactgtgtgcccagttaaatggtgatggtcatgtagatgcttgcattacatct
gacagtgatgcgttcctctttggggcaaaatgtgttataaaaacttttcgatctaattcc
aaagaaccatttgaatgtttctatatgtcagatattgaagctggtcttggtttgaagcgg
aaccacttgattgctctctctcttttggctggaaatgaccacgatttaaatggggttcaa
ggcattgggcttgatacagctcttctttttgcccaaacatttagtgaagatgagatatta
aataggttatgtgaaataggcaatggtgatgcttctctctttcaaggtggtatgaaatct
gtggatgatagtgtacccagttttgatgagagctcatcaaagacaaaatgttctcattgt
tctttttgtgggcatcccggcagcaaaagagctcatttcaagtcttcctgtgaattttgt
agcaatgcagttggtgagggttgcatgaaaaggtcagaggggttcaaatgcagttgctct
acctgtgatatggatcgtaaagaaaagaagctgaagaagtacgagaattggcgattgaaa
gttcttagcaagattgcactggagccaaatttccccaatgatgagattattgaaatgtac
ttgtgcaacaaccatggttgcttcaatgaaagtgacggtcctagcatattgtgggaaagt
ccaaagactgagatgctggttgagttcttgacttatcatcagcggtgggaaccgtcttat
attcgccagaggatgctgcccatgttgtcaaccatttttttgagggaaatggctaaaaat
cctgtgaaaaaattgttatatgggcagtatgagttcaattccataaatcgtttgaaaata
agatatgggcaccagtattatgtggtcaagtggaaaaaaactgcacctacattgtgttgt
gtcagttacccaatccctccggaggagtcggatatacaacaagatgatgttatggtggtt
gatgaatcctttagttcattggatgagtctgatgttcctacaatagatatgagtggtggg
tgctgctttttgttgaccgatgaaaatatggaccttgtccatgctgctttcccggaggaa
gttggcagatttttgctggagaaggaactgaaagaaatgaaaagaagaaaagcaaccggt
ggaaagccagaaacagcaggatcaaaaggcgttcagctaaatatcacagaattcttccgg
tctgctaaaaaacaatatgagacagaaccgggagaagacctaacgcagaatacggatagt
cagatagctgctgaaactggcaaagaaaagagaagtccatcgagttcaaatcttcccaag
tctgtgagacgccgtcttttgtttgactaa
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